Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq446 109 2e-18 seq1391 93.3 1e-13 >seq446 Length=1105313 Score = 109 bits (120), Expect = 2e-18 Identities = 173/245 (71%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| || | ||||||||| || ||||| ||| || ||||| || || ||| Sbjct 328826 TCCATAGCCTTTATCAGACGACGCTGGATGTAACCGGTTTCAGCCGTTTTGACGGCCGTA 328885 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 || || ||||| |||||||||||||||| |||||| | | ||| ||| || || Sbjct 328886 TCGATCAGACCTTCACGACCACCCATAGCGTGGAAGTAGAACTCGGTTGGTGTCAGTCCG 328945 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGTA 302751 ||| | ||| | || || ||||| || | |||||| || |||| || |||| | Sbjct 328946 GCAAGGTAAGAGTTTTCCACAAAACCTCGTGACTCGGGACCGTAATCATC---CTTGATG 329002 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 ||||| ||||| || | || | ||| | || || ||||| || || ||||||||| Sbjct 329003 AAGTGCGGCAGTGTGCGTTTGCGGAACCCGAACGGAATGCGCTTACCCTCCACGTTCTGC 329062 Query 302812 TGTCC 302816 || || Sbjct 329063 TGCCC 329067 >seq1391 Length=279726 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/176 (73%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 155556 GTTTTATCCTCATTTACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTC 155615 ||||| |||| ||||| ||||| || |||| || || ||||| || ||||| | Sbjct 2572 GTTTTGTCCTGCTTTACGAACATGTTCAGCGCAATCGAGGCTAGATTGCACACCGCTATT 2631 Query 155616 TC---CTTGTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTG 155672 || |||| | || ||| || |||||||| ||||||||| |||| |||||||||| Sbjct 2632 TCGTCCTTG--GACGA-GTACTCCACAATCTCGGTGCACAGGTTGGAACACTTGATGGTG 2688 Query 155673 CCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGG 155728 || | |||| ||| || |||| ||||| ||||||||||| || ||||| || Sbjct 2689 CCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACAGCATGTACGG 2744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471767193466801