Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_021342.2 Length=43378 Score E Sequences producing significant alignments: (Bits) Value seq1673 224 3e-54 seq1639 113 1e-20 seq854 109 2e-19 >seq1673 Length=1308 Score = 224 bits (248), Expect = 3e-54 Identities = 382/549 (70%), Gaps = 6/549 (1%) Strand=Plus/Minus Query 24517 ATCGTCGATGGTGGAACGGACGCAGACGTTGCGATGGCGTGT-TATCTGAAGAAGAACCC 24575 |||||||| ||||| || ||||| || || |||| || | ||||||||||||||||| Sbjct 682 ATCGTCGACGGTGGGGTCGATGCAGATGTGGCCATGG-GTATCTATCTGAAGAAGAACCC 624 Query 24576 AGGCGTCATGATGTATCAAGCCGCCACCCCTGTTACGGTTGAAGTCACGTCCCCAAAGTA 24635 |||| || | ||||||| || | || || || ||| || || ||||| || ||||| Sbjct 623 TGGCGCCAGGCTGTATCAGGCGGGAACACCATTTGAGGTAGAGGTAACGTCGCCGAAGTA 564 Query 24636 TCCGTCAAACAAGAAGGTGATCAAGTTCAGCCGCCCCAACTATGTGGACATGAACATCGT 24695 ||| | ||||||||||| ||| | ||||| || | ||| || ||||||||||| | Sbjct 563 CCCGACCAACAAGAAGGTAATCCGGGCGAGCCGGCCTATCTACGTCGACATGAACATGGC 504 Query 24696 AATCACAATCAAGAATGACGGCACACTACCGAGTAACGCCGACGAAGAGATTAAACAAGC 24755 ||||| ||| || |||||||| || ||| | || |||| || || |||| Sbjct 503 GATCACCATCGTCAACGACGGCACGCTGCCGTCTGACATCGACACGCTCATCAAGGAAGC 444 Query 24756 CATTTTCGACTACGCGGCAGGTGGTCTAATTCCTACCGATGTTGGTTTTAAAGTTGACGG 24815 | | || | ||| || || | |||||||| | |||||||| || ||| || ||| Sbjct 443 GGTCATGGAGTTCGCAGCCGGCGACCTAATTCCGGCGGATGTTGGCTTCAAAATTAGCGG 384 Query 24816 GTTCGACATCGGCGAAGAGGTTCCGTATACGACTATTTTCACACCGATTAACAAGGTGAT 24875 ||||| || ||||| || || | | || || ||||| ||||| ||||||||||| Sbjct 383 ATTCGATATTGGCGAGACAGTGCCATTCAGCACGATGTTCACGCCGATCAACAAGGTGAT 324 Query 24876 TGGTGCCTATGGTAACAGTTACGTGCAGGATATGACTCTCAATGGCGCGCGTACCAACGT 24935 || ||||||| || || || || | | || |||||||||| | ||||| Sbjct 323 CGGATCCTATGGCAATAGCTATGTTTCCCTTCTCCAGCTGAATGGCGCGCAGGCGAACGT 264 Query 24936 GGCGATAGCGTTTAATCAGTTGTCACGTTGGTTAACATCTAACATCACGGTGAACATCGT 24995 ||| || |||| || ||| ||||||| ||| ||||||||| ||| || Sbjct 263 GGCAATCGCGTACAACCAGATGTCACGCTGGACCGAGAGTAACATCACCGTGGTAGTCAC 204 Query 24996 ATGAGTTTAACA--CCGAACCGTATTTACGCACAGTATCGTAATCAGCCTAAAGCTGTAG 25053 ||| | |||| ||| | || |||||||||||||| || || |||| || ||||| | Sbjct 203 CTGA--TGAACATTCCGGATCGCATTTACGCACAGTACCGAAACAAGCCGAAGGCTGTGG 146 Query 25054 CATGGTACG 25062 | ||||||| Sbjct 145 CTTGGTACG 137 >seq1639 Length=1372 Score = 113 bits (124), Expect = 1e-20 Identities = 412/635 (65%), Gaps = 15/635 (2%) Strand=Plus/Minus Query 6794 CATTACTCGCCGTGAATATACGGACGAGGGATTTCTGCGTGTACCGGGACATGTGGCGCG 6853 |||||| | | ||||| || ||||||||||| || || ||||| | ||||| | Sbjct 1195 CATTACCCAAAGGGAATACACCGACGAGGGATTCCTCAAGGTGCCGGGCCGCGTGGCCAG 1136 Query 6854 CACGGGGATTCAGGAATATCTCGCCTCTGAACTCGGTCTGAACGACCGAAACCCTAACGA 6913 || |||||||||||||| || ||| ||| || || |||| | | ||||| Sbjct 1135 GACCGGGATTCAGGAATACCTGGCCCGTGAGCTGCAACT---CGACGGCGATCCTAATCG 1079 Query 6914 TATTATCCGCGTTTATCGTCCTAAGAACGAAGTTTTTAACAGTAAATCCCTGCTGTCTTA 6973 ||| |||| ||||| || || | || || || ||| | || ||| | || Sbjct 1078 TATCGTCCGGGTTTACCGGCCGCCCGAAGAGGTGTTCAACGACACCTCTCTGAGCACCTA 1019 Query 6974 CGATGGCGTGGACA-TCACGCTTGAACACCCAAACGGCCTCGTAAACGCCGACAACTTCC 7032 ||| |||| | ||| ||||| ||| ||||| || | || || | || ||| | || | Sbjct 1018 CGACGGCGCG-ACAGTCACGAATGACCACCCCAAAGAACTGGTCA-CGTCGAAGAATTAC 961 Query 7033 GTAAAACCA---CGGTTGGCGTGGTGCGTGGTAAAGGTCGTCAATACGGTGAGTTCGTAG 7089 || || | || |||| ||| || ||| || || | ||||||| ||||| Sbjct 960 --AAGTCCGTATCTGTCGGCGAGGTTCGCGGTCCTGGCCGGCGCGACGGTGATTTCGTTC 903 Query 7090 AGTGTGACCTCATCGTTAAAGATAAGGCGGCGATTCAGTCCGTACAGTCTGGTAAATGTG 7149 || || || ||| | || ||| || | | || | | | | | || || || | Sbjct 902 TCTGCGATCTGATCATCAAGGATCAGAAGACCATCGACGACATCAACGCCGGAAAGTGCG 843 Query 7150 AACTGTCGGCAGGTTATACCGCGTCGTACGATTACGAGCCGGGCGAGACGCCGGAAGGTG 7209 | || || || || || ||||| |||| |||| ||| |||| || | || || Sbjct 842 AGCTATCCGCCGGATACACCGCCGAATACGTGTACGGGCCTGGCGTTACCGCCGACGGCC 783 Query 7210 AACCGTACGATTACATCCAGCGTGACATTAAGATTAACCATGTCGCGATTGTTGGCCGCG 7269 | ||||| |||| |||||| |||| | || ||||| ||| | || | | Sbjct 782 AGGACTACGAATACACCCAGCGCAACATCATCATCAACCACCAAGCGGTGGTCACCAAAG 723 Query 7270 CTCGTGCCGGTCGCAACGCGCGTATTCTCGACCACAAACC-GGAGGGCACTCGAATGCCT 7328 | | || || | | ||| || || ||||| ||| || ||||| || ||| ||||| Sbjct 722 CGAGAGCGGGCGGAATCGCTCGCGTTTTCGACACCAACCCAGGAGGCAACACGA-TGCCT 664 Query 7329 GTAATGATTACTACCGATAGCGGGCGTAGCGTCGATGTTGCCGACCCGAACAACGCACAG 7388 ||| | || || |||||||||||||| ||||| |||||||| || || ||||| ||| Sbjct 663 GTACTTATCACCACCGATAGCGGGCGCAGCGTTGATGTTGCTGATCCTGCGAACGCCCAG 604 Query 7389 GTTGTTGCCGATGCGTTTGACCGC--GCTGTAGCG 7421 | || ||||| |||| || ||| |||| |||| Sbjct 603 CTGGTCGCCGACTCGTTCGATCGCCTGCTGAAGCG 569 >seq854 Length=8426 Score = 109 bits (120), Expect = 2e-19 Identities = 333/504 (66%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 15852 ATTCTCAACCTGTCCGACGCTGACCGCAACGCGCATAAGTCCGCGCCAATTCGGATGCGT 15911 || ||| ||||||| ||||| || || ||||| | |||||| ||||| | || || || Sbjct 8425 ATCCTCGACCTGTCGGACGCCGATCGAAACGCCCGTAAGTCGGCGCCGCTGCGCATCCGC 8366 Query 15912 CTGTTCCGTTCCGGTTCCATCTGGGTTGTCGAAGTCGACGTAGACGTATTCTAAGGGGTT 15971 |||||||| | || ||||| |||||||| ||||| | ||||| | || | ||| Sbjct 8365 CTGTTCCGCGCAGGCGCCATCCACGTTGTCGATGTCGATCTCGACGTTTACTGATAGGTG 8306 Query 15972 AAACGAGATG-GCTTTCGAAAACTTTTCCAACGACAACACTGTAATCACGGTCAACGGTC 16030 | || ||| || | | || |||||| | ||| || |||| |||||||||| Sbjct 8305 ATCTGA-ATGAGCCTGAGCAA-CTTTTCGACAGACCTGTTCGTCGTCACCGTCAACGGTC 8248 Query 16031 GGTCAATCACCGATTGGGGGCAGCAAGACCCGC-CCAT-CAGCATGGCACCAATCGACCC 16088 || ||| || ||||| || | | || | |||| || | || || |||||| | Sbjct 8247 GGCAGATCCAGGACTGGGGCGAG--ACATCCACTCCATACACCGACGCGCCCATCGACGC 8190 Query 16089 CGCTAGCGTCGTGCGCCGTGGTGTCGGCGGTAACGCGGTACGCCTAGACCGTAAGAACCC 16148 | ||| ||||||| || ||||| ||||| || ||||| ||||| | || || Sbjct 8189 CAAGAGCCAGCTGCGCCGGGGCCAGGGCGGCAACGCAGTGCGCCTGGACCGCATCAATCC 8130 Query 16149 CGGCGCGCGCGTGGCAC-TATATTTGAACCCTGGCAGTTCGGACGCCGCTTATCTGCGCG 16207 || ||||| | || | || | |||||||| | | || | || || ||| | Sbjct 8129 GGG-GCGCGAGGTAAACATCTACCTCAACCCTGGTTCTCCAGATTCGGCCTACATGCAAG 8071 Query 16208 GTCTGTTCAACTCGCGGGCAAACGTTACATTCACGTACGAGCAAATCGGAACTCCTGAAA 16267 | |||||||||||| || |||||||| | || || ||||| || | |||| Sbjct 8070 GCCTGTTCAACTCGAACGCCAACGTTACCGTATCGGTAACCCAGATCGGCACCCTCGAAA 8011 Query 16268 ACACCATTAATACCGAGGGTGCTATCGTCAACGTCGGAGAGCGTGGTCGTGGTGGCGCGA 16327 || || | ||||| | |||||||||| || |||| ||||| || ||| | Sbjct 8010 CGGCCCTTGGCTCTGAGGGGGTGATCGTCAACGATGGCCAGCGCGGTCGCGGCGGCTC-- 7953 Query 16328 GTAGTATTACCGACGAACAATTCA 16351 | || |||||||| ||||||| Sbjct 7952 -AACCATCACCGACGATCAATTCA 7930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138683597782840