Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2119 123 3e-22 seq1446 96.9 4e-14 seq502 95.1 1e-13 seq2453 91.5 2e-12 seq642 87.8 2e-11 seq2 86.0 8e-11 >seq2119 Length=1501809 Score = 123 bits (136), Expect = 3e-22 Identities = 166/231 (72%), Gaps = 9/231 (4%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 ||||||||||| |||| ||||| |||| ||| || ||||| ||||| |||||| Sbjct 1235015 CCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTCCAGGCATCAGGCCACGCTTC 1235074 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || ||||| ||||| | ||| || || ||| ||||| || || ||||||||||| Sbjct 1235075 TTCAGCCAGAAGATTGAAGCGAAGCTTCCACTGAAGAAGATACCTTCAACGGCGGCAAAC 1235134 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATCGCC 869356 | | | ||| ||| ||||| | | ||| |||| | |||||| |||| ||| Sbjct 1235135 GCCACAACCCGTTCGCCAAAGTT------GGCCTTCTTGCTCGAGATCCAGTTCAGTGCC 1235188 Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGG 869407 ||||| ||||| ||| |||| |||||| ||| ||||||||| ||| ||| Sbjct 1235189 CAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGCGTTAAACAGG 1235239 >seq1446 Length=1019741 Score = 96.9 bits (106), Expect = 4e-14 Identities = 204/298 (68%), Gaps = 6/298 (2%) Strand=Plus/Plus Query 1573895 GGGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCT-CTTGG 1573953 ||| ||||| || |||||| || |||| ||| |||||||| || | || ||||| Sbjct 418791 GGGACCGCCGGGAGTGGGCAAAACGACGACCATACTCTGTCTGGCACGCATACTACTTGG 418850 Query 1573954 GCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACG 1574013 | | | || ||| ||||| || ||||| || || ||| | || ||||| | |||| Sbjct 418851 ACCCAACTTTCG-CGAAGCCGTACTTGAACTGAATGCTTCGAATGAACGCGGTATTGACG 418909 Query 1574014 TCGTGCGCAAGATCATCAAGCACCACGCCTCCA--AGAGGATCGACCTGCCGCCCGGACG 1574071 | || |||| | || || ||| ||| | | ||| | |||| | ||| || Sbjct 418910 TGGTACGCAGCAAGATTAAA-ACCTTTGCTCAACTAAAGGTAACAT-TGCCTCGCGGTCG 418967 Query 1574072 CCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCT 1574131 |||||| | | || ||||||||||| ||| | | ||| || |||||||| || || Sbjct 418968 TCACAAGATCGTAATTCTCGACGAGGCGGACAGTATGACGGAGGGTGCCCAGCAAGCGCT 419027 Query 1574132 GCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACG 1574189 ||| || ||||||| || ||||||||| ||||| || ||||| ||||||||| Sbjct 419028 TCGGCGAACGATGGAAATCTTCAGCAACACGACACGCTTCGCACTGGCCTGCAACACG 419085 >seq502 Length=388983 Score = 95.1 bits (104), Expect = 1e-13 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 1592108 AAGCGCACCGACGACATCTCGC-CGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCAC 1592166 |||||||| ||||| || | || ||||||| || || | || || ||| || Sbjct 40916 AAGCGCACAGACGATAT-TAGCTCGTGGGATGCCGACTTCCTGAAGGTGGACCAGGGTAC 40974 Query 1592167 CCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGG 1592226 || || ||| |||| || || || ||||| || ||||| ||| || || || || Sbjct 40975 GCTATTCGAGCTGATTCTGGCTGCGAACTATCTGGACATTAAGGGGCTACTAGACGTTAC 41034 Query 1592227 GTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTT 1592286 ||||||| | ||||| ||||||||||||||||| | || || ||||| ||||| || || Sbjct 41035 GTGCAAGACGGTGGCGAACATGATCAAGGGCAAAACCCCGGAAGAGATTCGCAAAACGTT 41094 Query 1592287 TAACATCAAGTACG 1592300 ||||| ||| ||| Sbjct 41095 CAACATTAAGAACG 41108 >seq2453 Length=595837 Score = 91.5 bits (100), Expect = 2e-12 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 1852543 ACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATGGGCACAAAGTAGCCTAGGTGCGG 1852602 ||||||||| | ||||||||||||| ||| | |||||||||||||| | | |||||| Sbjct 77992 ACAGCCGGCTTTAAGAAAGTCGGCCACCTTGGACATGGGCACAAAGTAAGCGATGTGCGG 77933 Query 1852603 GTTGCCCGTCGGCGCCGTGCCCCAATATAT 1852632 ||||| |||| ||||||||||| ||||| Sbjct 77932 TTTGCCGGTCGTAGCCGTGCCCCAGTATAT 77903 >seq642 Length=4209 Score = 87.8 bits (96), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || ||| | ||| || ||||| || ||||| ||||| | || Sbjct 800 GCTTGGCCAACTCACCAGGCAACAGCAGACGGACGGCCGTTTGGATTTCGCGGGACGTGA 859 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| |||||||| ||||||||| ||| || |||| ||||||| |||| | Sbjct 860 TCGTCGAACGCTTGTTGTAGTGCGCCAAGCGGGATGCTTCGGCAGCGATGCGCTCGAAAA 919 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||| ||||| |||| || || || || || | Sbjct 920 TGTCGTTCACGAAGCTGTTCATGATGCTCATCGCCTTGGAAGAAATTCCGGTATCCGGAT 979 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || || | ||||||||||||| Sbjct 980 GGACTTGTTTCAACACCTTGTAGATG 1005 >seq2 Length=1335683 Score = 86.0 bits (94), Expect = 8e-11 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||| ||||| ||| | || ||||| || |||||||| ||||| | ||||||| Sbjct 268317 GCCAACTCGCCCGGCAACAGTAGTCGCACCGCCGTCTGGATTTCGCGGGACGTGATCGTG 268376 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 || ||||| |||| ||||| ||| || || | | || || |||| |||||| Sbjct 268377 GACCGTTTGTTGTAGTGTGCCAGCCGGGACGCTTCCGCCGCAATCCGCTCGAAGATGTCG 268436 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || |||||| | ||||| |||| || || || ||||| || ||| Sbjct 268437 TTGACGAAGCTGTTCATAATGCTCATCGCCTTGGATGAAATACCGGTATCGGGATGGACC 268496 Query 1254528 TGCTTGAGCACCTTGTAGAT 1254547 ||||| | |||||||||||| Sbjct 268497 TGCTTCAACACCTTGTAGAT 268516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106919841102341