Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1391 309 3e-79 seq2452 145 7e-30 seq147 116 3e-21 >seq1391 Length=279726 Score = 309 bits (342), Expect = 3e-79 Identities = 1173/1809 (65%), Gaps = 59/1809 (3%) Strand=Plus/Plus Query 138139 TTTAGCAGTGAAGATTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTC 138198 ||| ||||| | ||| || || ||||| | || |||| | || || || || | | Sbjct 1675 TTTTGCAGTTTCGTTTTGTCCACCGTAAATTGGATCGCATTCACAGCCGGCTTGGTGCGC 1734 Query 138199 AGATAATACATTCCCGTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG 138257 | || ||||| || ||||| || ||||| |||| | |||| | || ||||| || || Sbjct 1735 AAGTAGTACATGCCAGTTTTCAATCCCATCTTCCAAC-CGTAAAAATGGATCGACGTCAG 1793 Query 138258 TAACGCGTAAGTCGGTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGC 138317 | || | || | || | ||||| |||||||| ||||||||| || || Sbjct 1794 CTTGCCATAGTTTGGCTCGGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGC 1853 Query 138318 GCCTCGATCAATGGCCATGTTAATTAAATTTTT-ACTTTTCATCTCCCACACGGTCTTGT 138376 || ||||| ||||| || || | |||| || | |||||||| || || |||| Sbjct 1854 TCCCCGATCCGCTGCCATTTTGATGCACGTTTTCACCGAT-ATCTCCCAGACCGTTTTGT 1912 Query 138377 ATAGATCACGAATATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCC---GTTGGCCG 138433 | || || || || | ||||||| | | || |||||||| ||| ||||| | Sbjct 1913 ACAGGTCGCGTATTTCCTGCGGTATAGCCTCTATCTTTTGAATCGACCCATTGTTGGACA 1972 Query 138434 CAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCA 138493 ||| | || | | ||||||| | ||| || || | | || | | || Sbjct 1973 GAAT--TTCGTTCT-TCATGTCGAGATCCCACAAGCCCATGTTAGTTAGATCCTGCAGCA 2029 Query 138494 GATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGG 138553 ||| ||| | ||||| || || || | || || || | ||||| ||| | Sbjct 2030 GATGGTGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGATG 2089 Query 138554 TGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGT 138613 || | ||||| |||||||| || || || || || || || || | || |||||||| Sbjct 2090 TGTACGGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCATCG 2149 Query 138614 ACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACC 138673 |||| || | || || || | |||||| | || |||||| | | | || Sbjct 2150 GAGCCAACAGCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGCCC 2209 Query 138674 AGTCCCACAAA-TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTT 138732 ||| ||| | | ||| |||| | ||||||||||| |||||||| | || || ||| Sbjct 2210 AGTTCCATAGAGTCG-TAGGCTCCTTGTTCCACATCTCGTACTGCAGGATGCCTTTGCTT 2268 Query 138733 GCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGC 138791 | || ||||| ||||||| ||||| || | | | || ||||||||| ||| || Sbjct 2269 ACCGGGCTGCCCTCGTACGTTTCGTACGGTCC-ATCACGAGCGGCCAACTCGCAGCTAGC 2327 Query 138792 CTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGC 138851 || ||||| |||||||| || |||||| ||||| || || || | | ||||| | Sbjct 2328 TTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTGAGCCTCCTC 2387 Query 138852 GCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCC 138911 ||| |||||||| ||| | || ||||||| ||||||| || ||||| || | || Sbjct 2388 GCTTTCGTACGGATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGCC 2447 Query 138912 GACAGGGCGATGGCGCAGATTTGA-CGCTTTTGCGGCTTCG--ATAGGATAATAGTTTAC 138968 || || | ||||||| || || ||||| | || || | ||| || ||||| || Sbjct 2448 GATGGGTCTGTGGCGCATGTTGGAGCGCTT---AGCCTCCGGCACAGGGTAGTAGTTAAC 2504 Query 138969 ATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAA 139028 || ||||||||||| | ||| || || | || | | | ||| | |||| Sbjct 2505 GTCAATGATTTTGTTCAGATTGCGTGTCACTATTTTGGCCACTTCCTTCAGCTTAGCAAA 2564 Query 139029 ATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGC 139088 |||||| || ||||| | | || || |||| | ||||||||| Sbjct 2565 ATCGTACGT------TTTGTCCT------GCTTTACGAACATGTTCAGCGCAATCGAGGC 2612 Query 139089 TATGTTGCACACCGCCACTTCGT-CGGGGTCGCTGTATTCGACAATTTCGGCACACAAAT 139147 || ||||||||||| | ||||| | || || ||| || ||||| |||| |||| | Sbjct 2613 TAGATTGCACACCGCTATTTCGTCCTTGGACG-AGTACTCCACAATCTCGGTGCACAGGT 2671 Query 139148 TACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGT 139207 | ||||||||| || || | || || |||||||| || || ||||| ||||| |||| Sbjct 2672 TGGAACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGT 2731 Query 139208 AAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT-GAATTTGAAC---AAG 139263 | ||||| |||||| || ||||| || || | ||| || || | | ||| | | Sbjct 2732 ACAGCATGTACGGTACACCCGTTTCAACCTGCGACTCGATGATAGCA----AACCATAGG 2787 Query 139264 TCCCTAGCTTGTATTTGACGCACGTAAA--GTTCGTCGCGCTCGTACTTTTCGTAGAGTT 139321 ||| || | | || || | |||| | | || ||||||| ||| || | Sbjct 2788 TCCTGCGCCTTCACCTGTCGAA--TAAAGCGACCCTCCTTCTCGTACCCCGTGTACAGCT 2845 Query 139322 CGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCG 139381 ||||| ||| || | | || | | || |||| | || |||||||| || Sbjct 2846 TCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGAC 2905 Query 139382 ACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACA 139441 ||| | ||||||||| ||| ||| |||||||||||||||| ||||| | ||| | | Sbjct 2906 TCCACATTTCGTTCGCCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAA 2965 Query 139442 GCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAA 139501 || || || || | ||||| || |||| || | | || || || | Sbjct 2966 ACATGTCCCGGGCTCGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGA 3025 Query 139502 AAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGT---TTGCCAC 139558 | | || ||||||| || || |||||||| || | || || |||| ||||||| Sbjct 3026 ATATATCTCCGTGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCAC 3085 Query 139559 CTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCG 139618 | || ||||| | ||| | | ||| ||| | ||||||||||||||| |||| ||| | | Sbjct 3086 CCTGGTCGACATACCGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTG 3145 Query 139619 CTGTTCCGTTGGTGCTACGGATGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGAT 139676 ||||||| || | | ||| | ||| | || |||| | || || || | Sbjct 3146 AAATTCCGTTCGTAC--CAGATATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCAG 3203 Query 139677 GCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATAC 139735 ||| || || ||| || ||||||| || | | || | || | | || ||||| |||| Sbjct 3204 GCCAATACCACCGGCAGATTTGGAAATAAGGGCACACT-GCTTGAGCGTATCGTAGATAC 3262 Query 139736 CTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCG 139795 | || ||||| || ||| || | |||||| || || || || || || | | || Sbjct 3263 CCTCGATACTGTCATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCG 3322 Query 139796 TGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGT 139855 || | || ||||||| || || || || ||||| | | |||| || | || Sbjct 3323 TGGCCGCCGCAAACATGGTCGGTGAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGT 3382 Query 139856 ACGTTTCGATGGCGCT-CA-CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAG 139913 |||||||||| |||| || | || || ||||||||||||| | ||| |||||||| Sbjct 3383 ACGTTTCGAT--CGCTGCATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAG 3440 Query 139914 CATATGTTG 139922 ||| || || Sbjct 3441 CATGTGCTG 3449 >seq2452 Length=1332465 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || ||||| || ||||| || || || || || | Sbjct 204093 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTC 204034 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | |||| || || |||||||| || || || ||||| ||||| ||||| Sbjct 204033 GGATACGATCGAAAATGTGAAGGCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGATCA 203974 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| ||| |||| |||||||| || |||||||||||| | | |||| ||||| || Sbjct 203973 ACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGTCCGATTACAA 203914 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| || || |||||| | || ||||||| || Sbjct 203913 CATCCAGAAGGAGTCGACCCTTCATTTGGTGCTTCGCCTGCGCGGTGG 203866 >seq147 Length=443619 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || || || || || || || ||||| || || | | Sbjct 111699 ATGCAGATTTTCGTGAAAACTCTTACTGGCAAGACCATCACACTCGAGGTCGAGCCTTCG 111758 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || ||||| Sbjct 111759 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 111818 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || |||||||||||| | | | || ||||| ||| Sbjct 111819 CAGCGACTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCTGATTACAAC 111878 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||||||||| || || ||||| ||||| | || ||||| Sbjct 111879 ATCCAGAAGGAATCGACCCTTCATCTGGTGCTGCGACTTCGTGGAGG 111925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449882567796440