Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq169 154 1e-32 >seq169 Length=466543 Score = 154 bits (170), Expect = 1e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503 |||||||| || || || ||||| || |||||||| ||||| || | |||||||| || Sbjct 222570 TGCGTTTGAGCTCCTAGTTCGCAGCCAAAGTACTTGGTCGGATAGGTTGCCGGACGACCG 222511 Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 | || ||| | |||| |||||| ||||| || || ||||||||||| ||||| || Sbjct 222510 ATTGCTCGGGCCACCTCGGCCATGTTCACGATCACCGTTTTGATGCCGTTTCCCTTGCCC 222451 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 || ||||| ||| |||||| ||||| ||||| |||||||| ||| | ||||||||| Sbjct 222450 TCTACCTTTGCGTTGATGCGGGGCATCTTGTAACGGTAGAAGATGTCGGTCACATTGCGA 222391 Query 34624 TTAACGTTCACAGTCCCCAT 34643 || |||||||| || |||| Sbjct 222390 TTCACGTTCACGGTAGCCAT 222371 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 |||||| || || | ||||| || || | ||| || || | |||| ||||| | Sbjct 222881 CGGCGGATTCTTGATGATGAACGTATTAACCTTGTGGTTGACCTCGAGCGGACCGTGGAA 222822 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 ||||| || ||||||||||| ||||| | ||| |||| || ||||| || || || Sbjct 222821 CCCGCAAGCCTTGCAGCCCTGCGAGATAGTTCCCTTCTTAGACGAGACGATAAGATCCGT 222762 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 ||| ||||||||||| ||||| || | ||| |||||||||||||| ||||| ||||| || Sbjct 222761 CTCGGGGTTGTCACACTCCGGGCAGAGCACGAACTTGCGGATGAAGCCATCGAGCAGATC 222702 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| | || | | ||||| || || || || ||||| |||||||| Sbjct 222701 CTGCAGTTTGGCCGCATCGTGCGAACCATTCACAATGAAGCGTTCGTT 222654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412828150781789