Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2452 114 1e-20 seq890 95.1 9e-15 >seq2452 Length=1332465 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||||||||| || || || || || ||||| ||||| | | |||||| | Sbjct 203878 CGAAGCACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGCGTGCGACCA 203937 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||| ||| | |||| | || |||||||| ||||| ||||| || Sbjct 203938 TCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTA 203997 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || ||| |||| | || || || | || || ||||| || || Sbjct 203998 TCCTGGATCTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 204057 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAACGTATG 29799 || || || || | |||||| || || |||||||| || || ||| || Sbjct 204058 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTGAACCGTCTG 204105 >seq890 Length=1089215 Score = 95.1 bits (104), Expect = 9e-15 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | || ||| || |||| ||| ||||||||||| || ||||||||||| |||| Sbjct 230379 TCCACCACGCAGACGGAGAACCAGATGGAGCGTGGATTCCTTCTGAATGTTATAGTCCGA 230320 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || |||||| ||| || || || ||||| ||| | |||| | |||||||| || || Sbjct 230319 AAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGTGG 230260 Query 29679 AATACCCTCTTT 29690 || ||||| || Sbjct 230259 GATGCCCTCCTT 230248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385206650641893