Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1391 96.9 3e-15 seq2119 89.7 5e-13 >seq1391 Length=279726 Score = 96.9 bits (106), Expect = 3e-15 Identities = 503/793 (63%), Gaps = 25/793 (3%) Strand=Plus/Plus Query 150371 ACGGTAAATTGCTGCGAATTGGCCGCCGGAAGTGTGCGAAAATAGTACATGCCGGTTTTG 150430 || |||||||| || ||| | ||||| ||||| || ||||||||||| ||||| Sbjct 1696 ACCGTAAATTGGATCGCATTCACAGCCGGCTTGGTGCGCAAGTAGTACATGCCAGTTTTC 1755 Query 150431 AGGCCGCGCTTCCAACCGTACATGTGCACCGACGCCATTTTAGGCAAAGTAGGGTTTGCC 150490 | || |||||||||||| | || | ||||| || || | || ||| || | | | Sbjct 1756 AATCCCATCTTCCAACCGTAAAAATGGATCGACGTCAGCTT-GCCATAGTTTGGCTCGGC 1814 Query 150491 -ATGTACACGTTGAACGATTGACTTTGATCGATAAATGCTCCCCTGTCTGCTGCCATTTC 150549 | || | |||||||||||| ||||||||||| ||||||| || |||||||||| Sbjct 1815 GACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCTCCCCGATCCGCTGCCATTT- 1873 Query 150550 AATCATATATTTTCCATTGTTCTCCCAAATTTCCCAGATTGTCATGTACAGCTTTTTTAG 150609 | || | || ||| || | || ||||||| || ||||||| | || Sbjct 1874 --TGATGCACGTT------TTCACCGATATCTCCCAGACCGTTTTGTACAGGTCGCGTAT 1925 Query 150610 ATTGTCGGGAAT----TTTGGCGATAGAAGCTATCGATCCTCTGTTTGCCATGATT--GT 150663 | | || || | | | | || ||||| || |||| | || ||| || Sbjct 1926 TTCCTGCGGTATAGCCTCTATCTTTTGA----ATCGACCCATTGTTGGACAGAATTTCGT 1981 Query 150664 TTTTCGCATACTATTTGTATAGAGATTTAATTTGATTAGATCATCGACCAAGTAGCGGTT 150723 | ||| | | | | | | | || ||||||| | | || | | |||| Sbjct 1982 TCTTCATGT-CGAGAT-CCCACAAGCCCATGTTAGTTAGATCCTGCAGCAGATGGTGGTT 2039 Query 150724 GACAACTTGAAATTCGCCCGACAAAACACGTCTCAAAAACAAATT-ACTGTGAAACGGTT 150782 || || || || |||||||||| || || || | | || |||| |||| | Sbjct 2040 CACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGATGTG-TACGGCT 2098 Query 150783 CAAATGACTCGTTGTTGTTGAGTATTTGTGCGGTCGTGGCCGTCGGCATGTACGCCACAA 150842 | || || || || ||| ||| ||||| || |||| ||||||||||| |||| | Sbjct 2099 CGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCATCGGAGCCAACA 2158 Query 150843 GCAATGAATTACGTAATCCGTATTTTTGTATATTTATTTTCAACTGTGACCAGTCCCATA 150902 |||| || || || | |||| || || ||| ||||||| || ||||| ||||| Sbjct 2159 GCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGCCCAGTTCCATA 2218 Query 150903 ACGAAGTCGGTACCGTATTCCACAAATCGTATTGCAATATTCCTTCGCTCGCTTTGCTAC 150962 | || || || | ||||||| ||||| |||| || |||| ||| | ||| | Sbjct 2219 GAGTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGATGCCTTTGCTTACCGGGCTGC 2278 Query 150963 CGGCAAACGTGCTATAAGGCTCACTAACAGATGCCAGTTCGTAACTGGCCTCGAGCGCAG 151022 | | |||| || || || | || |||| ||| | || || || ||||| Sbjct 2279 CCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCGCAGCTAGCTTCCAGCGCTC 2338 Query 151023 CATGATACACAGTTTCAGCAATTTGTTTATTCAATAGAACGGCAGCATCGCTCACGTACG 151082 ||| || | ||||| || |||| |||| | || | ||||| |||||| Sbjct 2339 CATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTGAGCCTCCTCGCTTTCGTACG 2398 Query 151083 GTATGCGCAACATAACAAATGCATCGGCCAAACCTTGAATGCCTATGCCGATGGGACGAT 151142 | ||||| || | || |||||||||| || || | || ||||||||||| | | Sbjct 2399 GATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGCCGATGGGTCTGT 2458 Query 151143 GGCGCATATTAGA 151155 ||||||| || || Sbjct 2459 GGCGCATGTTGGA 2471 >seq2119 Length=1501809 Score = 89.7 bits (98), Expect = 5e-13 Identities = 170/245 (69%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 50199 AACGCTTTCGATAATATTCCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGACT 50258 ||||| |||| | | ||||| ||| || |||| || |||||| |||| |||| Sbjct 1235232 AACGCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCACTGAACTGGATC 1235173 Query 50259 aaaaacaaaaaa-CTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGT 50317 | ||| || | |||||||| ||||| | |||||||||||| ||||||||| | Sbjct 1235172 TCGAGCAAGAAGGCCAACTTTGGC-GAACGGGTTGTGGCGTTTGCCGCCGTTGAAGGTAT 1235114 Query 50318 GtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAA-AACCTTAGGCATAATGCCCG 50376 || || || ||||| || | || || | | || || | | ||| | ||||| | Sbjct 1235113 CTTCTTCAGTGGAAGCTTCGCTTCAATCTTCTGGCTGAAGAAGCGT-GGCCTGATGCCTG 1235055 Query 50377 GCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGT 50436 | ||||| || |||||| ||||||||||||||||||| | ||| |||||||| | Sbjct 1235054 GACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTACACTGTGACTTTGCCT 1234995 Query 50437 GTTTG 50441 || || Sbjct 1234994 GTCTG 1234990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488527676523600