Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1669 114 3e-20 >seq1669 Length=235595 Score = 114 bits (126), Expect = 3e-20 Identities = 217/317 (68%), Gaps = 2/317 (1%) Strand=Plus/Minus Query 198310 AACTCGAAAAGGCGGAAACACATGACCCTCTATGGAATGCATCGCAAATACAGATGATAA 198369 |||| || | ||| |||| |||||| ||| ||||| | |||| | |||||| | | Sbjct 204933 AACTGGAGACGGCCAAAACGCATGACGATCTGTGGAACTCGGCGCAGCTGCAGATGGTGA 204874 Query 198370 GAGAAGGAAAAATGCATAGTTTTTTAAGAATGTACTGGGCTAAAAAGATACTTGAATGGA 198429 || || || |||||| | || | | ||||| ||||| ||||||||||| || |||| Sbjct 204873 AGGAGGGCAAGATGCATGGCTTCCTGCGGATGTATTGGGCGAAAAAGATACTGGAGTGGA 204814 Query 198430 CAAGAACACCGGAAGACGC-TTTGAGTTATAGTATCTATCTAAACAATAAGTACGAACTA 198488 | | ||| || || || || ||||| | |||||||| ||| || ||| || Sbjct 204813 CGAAAACGCCCGAGGAAGCGCTTGAGACGGCG-ATCTATCTTAACGATCGGTATAGCCTG 204755 Query 198489 GACGGCACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACATGAT 198548 || || ||||| ||||| ||||| ||||| |||||||| || ||| | || ||| Sbjct 204754 GATGGGCGCGATCCAAACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGTATTCACGAT 204695 Query 198549 CGAGCGTGGAAAGAAAGACCTATATTTGGGAAGATAAGATATATGAATTATGAGGGTTCT 198608 | | ||||| || | || ||||| || || |||| ||||| ||||| || | | Sbjct 204694 CAGGGTTGGAAGGAGCGCGAAATCTTTGGCAAAATTCGATACATGAACTATGAAGGATGT 204635 Query 198609 AAGAAAAAATTTGATGT 198625 ||| ||||| |||| Sbjct 204634 AAGCGTAAATTCAATGT 204618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981793574566147