Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1669 109 1e-18 >seq1669 Length=235595 Score = 109 bits (120), Expect = 1e-18 Identities = 216/317 (68%), Gaps = 2/317 (1%) Strand=Plus/Minus Query 182993 AACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGA 183052 |||| || | ||| |||| |||||| ||| ||||| | | || | |||||| ||| Sbjct 204933 AACTGGAGACGGCCAAAACGCATGACGATCTGTGGAACTCGGCGCAGCTGCAGATGGTGA 204874 Query 183053 GAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGA 183112 || || || |||||| | || | || ||||| ||||| ||||||||||| || |||| Sbjct 204873 AGGAGGGCAAGATGCATGGCTTCCTGCGGATGTATTGGGCGAAAAAGATACTGGAGTGGA 204814 Query 183113 CAAGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTA 183171 | | ||| || || || || ||||| | |||||| | ||| || ||| || Sbjct 204813 CGAAAACGCCCGAGGAAGCGCTTGAGACGGCG-ATCTATCTTAACGATCGGTATAGCCTG 204755 Query 183172 GACGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGAT 183231 || || ||||| ||||| ||||| ||||| |||||||| || ||| | |||||| Sbjct 204754 GATGGGCGCGATCCAAACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGTATTCACGAT 204695 Query 183232 AGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCT 183291 | ||||| || | || ||||| || || |||| ||||| ||||| | | | Sbjct 204694 CAGGGTTGGAAGGAGCGCGAAATCTTTGGCAAAATTCGATACATGAACTATGAAGGATGT 204635 Query 183292 AAGAAGAAATTTGATGT 183308 ||| ||||| |||| Sbjct 204634 AAGCGTAAATTCAATGT 204618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903381014773280