Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1391 473 1e-128 seq147 143 3e-29 seq2452 123 2e-23 seq2119 107 2e-18 seq890 82.4 7e-11 >seq1391 Length=279726 Score = 473 bits (524), Expect = 1e-128 Identities = 979/1440 (68%), Gaps = 24/1440 (2%) Strand=Plus/Plus Query 148250 CAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCT 148309 ||||| || ||||||||||| |||||||| | |||||||||| || ||||| Sbjct 2028 CAGATGGTGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGA 2087 Query 148310 CGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCAT 148369 || |||| || ||||| || || ||||| | || || || |||| ||||| ||||| Sbjct 2088 TGTGTACGGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCAT 2147 Query 148370 GTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGC 148429 || | ||||| ||||||||| | |||| | || || || ||||| | || Sbjct 2148 CGGAGCCAACAGCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGC 2207 Query 148430 CCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCT 148489 ||||| ||| || | || || | ||||||||| ||||||||||| ||||| ||| Sbjct 2208 CCAGTTCCATAGAGTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGATGCCTTTGCT 2267 Query 148490 AGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGC 148549 | |||||||||||||||| ||||||||| | || |||| |||||||| || Sbjct 2268 TACCGGGCTGCCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCGCAGCTAGC 2327 Query 148550 CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTC 148609 || ||||| || ||||| || || ||| || || ||| || ||| ||| Sbjct 2328 TTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTGAGCCTCCTC 2387 Query 148610 GCTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGC 148668 |||||||||||| ||| |||| | | ||||| ||||| | |||||| || || | || Sbjct 2388 GCTTTCGTACGG-ATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGC 2446 Query 148669 CAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGATAGTGGTTGCGG 148727 | ||||| | ||| ||||||||| | || ||| | | || |||| ||| | Sbjct 2447 CGATGGGTCTGTGGCGCATGTTGGAGCGCTTAGC-CTCCGGCACAGGGTAGTAGTTAACG 2505 Query 148728 TCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAA 148787 || ||||| |||| |||||||| ||| | || | | | |||| ||||| Sbjct 2506 TCAATGATTTTGTTCAGATTGCGTGTCACTATTTTGGCCACTTCCTTCAGCTTAGCAAAA 2565 Query 148788 TCGTAC---TTGTC---ATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCAC 148841 |||||| ||||| | ||||| ||| ||||| || || ||||||||||||||| Sbjct 2566 TCGTACGTTTTGTCCTGCTTTACGA-ACAT--GTTCAGCGCAATCGAGGCTAGATTGCAC 2622 Query 148842 ACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTG 148901 || || | || ||| || |||||| || ||||||| |||||| ||| || ||| Sbjct 2623 ACCGCTATTTCGTCCTTGGACGAGTACTCCACAATCTCGGTGCACAGGTTGGAACACTTG 2682 Query 148902 ATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTAC 148961 || ||| | ||||| ||||||||||| | || ||||| |||||||||||||||||| Sbjct 2683 ATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACAGCATGTAC 2742 Query 148962 GGTCCGCCAGTTTCCACCTGCGTTTCCA--CTATGAACCGATGCAGGTCCTGCGCGCGCA 149019 ||| | || ||||| ||||||| || | || || | || ||||||||||| || Sbjct 2743 GGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAACCAT--AGGTCCTGCGCCTTCA 2800 Query 149020 CTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGC 149079 | || | |||||||||||| |||||| || |||||| ||||||| | |||| Sbjct 2801 CCTGTCGAATAAAGCGACCCTCCTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGC 2860 Query 149080 CGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCG 149139 | | ||||| | | ||||| || | |||||| ||||| || ||||| ||| || Sbjct 2861 CCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACATTTCGTTCG 2920 Query 149140 CGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCT 149199 | | || |||||||| |||||||| || | |||||| ||||| | | ||| || | || Sbjct 2921 CCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTCCCG-GGCT 2979 Query 149200 TGCA-GTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGC 149258 ||| ||||| ||| |||| || | ||| | |||||| || ||||| Sbjct 2980 CGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATATATCTCCGTGC 3039 Query 149259 CACGGCTCAATGTACACCGCGAGCGCGCCCTTGCG---CTTGCCGCCCTGGTCGACGTGG 149315 |||||||| | || | |||| ||| || || ||||| ||||||||||| | Sbjct 3040 CACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTCGACATAC 3099 Query 149316 CGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTA 149375 || || | ||||| |||| || | ||| || | | || | | | | ||||| ||| Sbjct 3100 CGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCCGTTCGTA 3159 Query 149376 -GAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCC 149434 || | ||| | || ||| || | ||||||||| | ||| || || ||| | Sbjct 3160 CCAGAT-ATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGGCCAATACCACCGGC 3218 Query 149435 GTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCG 149494 | || || || || || | |||||| |||||| |||||||| ||||| Sbjct 3219 AGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGATACTGTCATC 3278 Query 149495 CTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACAT 149554 ||||||||||||||| || || ||| || || ||||| | ||||| ||||| Sbjct 3279 GGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTGGCCGCCGCAAACAT 3338 Query 149555 GGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCG 149614 ||| || || || || || || || | || || | ||||| |||| | | Sbjct 3339 GGTCGGTGAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGTACGTTTCGATCGCTGC 3398 Query 149615 GTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTC 149674 || ||||| ||||| ||||| || |||||||||||||||||||| ||||| || ||||| Sbjct 3399 ATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCATGTGCTGTGGCCGCTC 3458 >seq147 Length=443619 Score = 143 bits (158), Expect = 3e-29 Identities = 157/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| || || ||||| || |||||||| | ||| ||| | ||||| |||| Sbjct 111902 ATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCA-TCCTCCAGCT 111844 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | ||||| |||||||| || || || |||||||||||||| ||||| Sbjct 111843 GCTTGCCGGCGAAGATGAGTCGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCT 111784 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||| | |||||| | ||||| || |||| |||| ||| ||||| | Sbjct 111783 TGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCGAGTGTGATGGTCTTGCCAG 111724 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 | |||||||| ||||||||||||||| Sbjct 111723 TAAGAGTTTTCACGAAAATCTGCATG 111698 >seq2452 Length=1332465 Score = 123 bits (136), Expect = 2e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| ||||| ||||| || ||||||||| || |||| ||| | ||||| || Sbjct 203887 AAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGCGTGCGACCA-TCCTCCAG 203945 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || |||| || ||||| || || ||||| || || ||||| || ||| Sbjct 203946 CTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTATCCTGGAT 204005 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | ||| || | |||||| || || | ||| | ||| || || Sbjct 204006 CTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACC 204065 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| ||||| |||||||| Sbjct 204066 CGTGAGGGTTTTGACGAAGATCTGCAT 204092 >seq2119 Length=1501809 Score = 107 bits (118), Expect = 2e-18 Identities = 173/249 (69%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 ||| || |||||||| ||| || || ||||||||||| ||||||||||| || || Sbjct 1234990 CAGACAGGCAAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGT 1235049 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 || || ||||| | ||| | |||| | |||| || | || ||||| || || Sbjct 1235050 GAGTCCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTTCCACTGAA 1235109 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT 120818 ||| | || || ||| |||||| || || | || ||| | || | ||| ||||||| Sbjct 1235110 GAAGATACCTTCAACGGCGGCAAACGCCACAACCCGTTCGCCAAAGTTGGCCTTCTTGCT 1235169 Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGC 120878 |||||| |||| ||||| || ||||| || ||||||||||| | |||| || Sbjct 1235170 CGAGATCCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGC 1235229 Query 120879 GTTCAGCAG 120887 ||| | ||| Sbjct 1235230 GTTAAACAG 1235238 >seq890 Length=1089215 Score = 82.4 bits (90), Expect = 7e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 133548 GGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGC 133607 || |||||||| |||||||| ||||| ||||| | ||||| ||| || | || Sbjct 223804 GGTGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTCTCAATCGTATCCGATGGT 223745 Query 133608 TCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || | |||| ||| || |||||||||||||| |||||||||||||| Sbjct 223744 TCGACCTCCAGCGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 223692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483404647702520