Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1391 347 2e-90 seq2119 136 5e-27 >seq1391 Length=279726 Score = 347 bits (384), Expect = 2e-90 Identities = 1189/1838 (65%), Gaps = 24/1838 (1%) Strand=Plus/Plus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || || || || || | |||||||| || ||||||| || | |||| ||||| ||| Sbjct 1720 GCCGGCTTGGTGCGCAAGTAGTACATGCCAGTTTTCAATCCCATCTTCCAACCGTAAAAA 1779 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || || || || ||| ||| |||| ||||| | ||||| || | |||||| Sbjct 1780 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCGGCGACGTGAATGTTGAACGATTGCGAC 1839 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGA-ATTTC 68573 |||||||| || ||||| | ||| || |||||||| || || ||| || || || Sbjct 1840 TGATCGATAAACGCTCCCCGATCCGCTGCCATTTTGATGC-ACGTTTTCACCGATATCTC 1898 Query 68574 CCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA--GGCTCG-TATTTTGAATGGA 68630 ||| | || || | | | || || | || | | ||| | |||||||| || Sbjct 1899 CCAGACCGTTTTGTACAGGTCGCGTATTTCCTGCGGTATAGCCTCTATCTTTTGAATCGA 1958 Query 68631 TCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAA 68690 ||| | ||| | |||| ||||| || || || |||||| | | |||| Sbjct 1959 CCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAAGCCCATGTTAGTTAG 2018 Query 68691 AACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTA 68750 | | || ||||| | || || | || || || || || | ||| | | |||| Sbjct 2019 ATCCTGCAGCAGATGGTGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTA 2078 Query 68751 AATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGC 68810 || || || || || || | ||||||||||| || || ||||| ||||| || || Sbjct 2079 AACGTTCGATGTGTACGGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGC 2138 Query 68811 AGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTT 68870 || ||||| || |||| || || || | | ||| || | || || || || Sbjct 2139 CGTCGGCATCGGAGCCAACAGCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTT 2198 Query 68871 TAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930 | | | ||| | ||| ||| | || | ||||| | ||||| || || || Sbjct 2199 CAACTCTGCCCAGTTCCATAGAGTCGTAGGCTCCTTGTTCCACATCTCGTACTGCAGGAT 2258 Query 68931 TCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTC 68990 || || ||| | || | || ||||| || ||||| || | | || | || Sbjct 2259 GCCTTTGCTTACCGGGCTGCCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTC 2318 Query 68991 ACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 69050 || || || || | || || || || || |||||||| |||| | || || | ||| Sbjct 2319 GCAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTG 2378 Query 69051 TGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAAC 69110 || || || ||| | ||||| | | | || || ||||| |||| ||||| || Sbjct 2379 AGCCTCCTCGCTTTCGTACGGATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCAC 2438 Query 69111 CCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATA 69170 || || ||||| ||||| || | | | || || | | ||| || || | ||| || || Sbjct 2439 ACCGATGCCGATGGGTCTGTGGCGCATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTA 2498 Query 69171 ATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTT 69230 |||| || || ||||| || ||||| || |||| ||| |||| ||||| || || Sbjct 2499 GTTAACGTCAATGATTTTGTTCAGATTGCGTGTCACTATTTTGGCCACTTCCTTCAGCTT 2558 Query 69231 GAGAAAATCAAA----TCGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGAT 69286 |||||| | | |||| || || | ||||| ||||| || | || ||||||| Sbjct 2559 AGCAAAATCGTACGTTTTGTCCTGCTTTA-CGAACATGTTCAGCGCAATCGAGGCTAGAT 2617 Query 69287 TACAAACTGCTA---CCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTAC 69343 | || || |||| | || || || | || | | ||||| || || || || Sbjct 2618 TGCACACCGCTATTTCGTCCTTGGAC---GAGTACTCCACAATCTCGGTGCACAGGTTGG 2674 Query 69344 TACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAA 69403 ||| ||||| || || | || |||||||| ||||| ||||| || |||||||| | Sbjct 2675 AACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACA 2734 Query 69404 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAG 69463 | || |||| ||| ||||||| ||| || ||||| |||| ||| | | || | Sbjct 2735 GCATGTACGGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAACCATAGGTCCTGCG 2794 Query 69464 CATTTATTACGGTCTTGTAACGCTTCTCT--TTTTCATATTGTGTATATAGCCGTTCGAA 69521 | || | | ||| ||| || | || || || || || || ||| ||||| Sbjct 2795 CCTTCAC--CTGTCGAATAAAGCGACCCTCCTTCTCGTACCCCGTGTACAGCTTCTCGAA 2852 Query 69522 TTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACAC 69581 || || ||||| ||| ||||||| ||||| || | |||||||||| ||||| Sbjct 2853 CTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACAT 2912 Query 69582 ATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATC 69641 || | ||| || || ||||| || ||||| || ||||| || || ||| | || Sbjct 2913 TTCGTTCGCCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTC 2972 Query 69642 TCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATC 69701 | || || ||||| || || || ||||| ||||||||||||||||| | ||||| Sbjct 2973 CCGGGCTCGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATATATC 3032 Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761 ||||| || || ||||| || || | |||| || ||||| || || ||||| || Sbjct 3033 TCCGTGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTC 3092 Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821 | || | || || || || || || | || |||||| | | || || || | || Sbjct 3093 GACATACCGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCC 3152 Query 69822 ATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTC 69880 || || ||||| || || |||| | ||||| || | | | | || || || | Sbjct 3153 GTTCGTACCAGATATGTACGTTCCCTTCGCGCGGAT-GCAGTGCACGTTCAGGCCAATAC 3211 Query 69881 CTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGC 69940 | || || ||| || || || ||||| | || | || || || |||||||| || | Sbjct 3212 CACCGGCAGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGATAC 3271 Query 69941 TATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCAT 70000 | ||||| |||| | || ||||||||| ||||| || | | || |||| Sbjct 3272 TGTCATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTGGCCGCCG 3331 Query 70001 TAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAA 70060 ||| | || || || || || ||||| | || || ||||||||||| ||||| | Sbjct 3332 CAAACATGGTCGGTGAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGTACGTTTCGA 3391 Query 70061 TAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGA 70119 | |||| || || || | | | || || || || ||||| ||||||| ||| ||||| Sbjct 3392 TCGCTGCATCGATGTCTTCGCCG-TGGATACCGATGGCGACGCGCATCAGCATGTGCTGT 3450 Query 70120 GGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAAC 70179 || || || || | ||| || || |||| || || ||| ||||| |||||||| Sbjct 3451 GGCCGCTCGACAATCTTACCCTTGATCTTCAGCAAATACGATCGTTCCAAGGTTTTAAAT 3510 Query 70180 CCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 || ||||||||||| ||| || | |||||||| || Sbjct 3511 CCGAAATAGTTGTACCCAAAATCGCGATCGTAAATGAT 3548 >seq2119 Length=1501809 Score = 136 bits (150), Expect = 5e-27 Identities = 282/418 (67%), Gaps = 5/418 (1%) Strand=Plus/Plus Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504 ||| | ||| || ||||| || ||||| ||||| ||||| ||||| || | | Sbjct 1234822 CAAACGATCCGCCACAAACTCGATGTACTGCGACATCAGATCACAGTTCATGCCGAGCAT 1234881 Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 | ||| || || |||| ||| |||||||| | ||||| | || || || || || Sbjct 1234882 GTCAACGGGCAGTGCCTTCGTCAGAAACTCCTGCTCGATCACGACAGCATCGCGGATAAT 1234941 Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 | || || ||| | ||| || | | || || ||||| | ||||| || Sbjct 1234942 CTCCGTCACGCGCTCCTTCGACGGCTTCTGAACCAGATACTTGAACATCAGACAGGCAAA 1235001 Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 |||||| ||||| || || || | ||| | ||||| || || |||||||||||||| Sbjct 1235002 GTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTCCAGGCAT 1235061 Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744 || |||||||| || ||||| || || | ||| || |||| |||||||| ||||| Sbjct 1235062 CAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTTCCACTGAAGAAGATACCTTC 1235121 Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG----TATCATTATGTATCCACT 39800 || || ||||| || |||| | || || || ||| | | | ||||| | Sbjct 1235122 AACGGCGGCAAACGCCACAACCCGTTCGCC-AAAGTTGGCCTTCTTGCTCGAGATCCAGT 1235180 Query 39801 TCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 || ||||||| ||||| |||||||| || || |||| ||||| || || ||||| || Sbjct 1235181 TCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGCGTTAAACAG 1235238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686885848659720