Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1391 264 1e-65 seq2452 104 2e-17 >seq1391 Length=279726 Score = 264 bits (292), Expect = 1e-65 Identities = 1059/1646 (64%), Gaps = 45/1646 (3%) Strand=Plus/Plus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || || || ||||| || ||||| ||||||||||||||||| || |||||||| Sbjct 1690 TTGTCCACCGTAAATTGGATCGCATTCACAGCCGGCTTGGTGCGCAAGTAGTACATGCCA 1749 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGG--TAATTGG 130523 ||||| | ||| || || || ||| ||||| || | ||| || || | Sbjct 1750 GTTTTCAATCCCATCTTCCAACCGTAAAAATGGATCGACGTCA--GCTTGCCATAGTTTG 1807 Query 130524 GTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAG 130583 | | || ||| ||||||| ||||||||| ||||| ||||| || |||| || || | Sbjct 1808 GCTCGGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCTCCCCGATCCGCTG 1867 Query 130584 CCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATG 130642 |||| | || ||| | ||| | | |||||||| | || ||||| || || | || Sbjct 1868 CCATTTTGATGCACGTTTTCACCGAT-ATCTCCCAGACCGTTTTGTACAGGTCGCGTATT 1926 Query 130643 TGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGC 130702 | | ||||| | | ||| ||||| || ||||||| | ||||||||| | Sbjct 1927 TCCTGCGGTATAGCCTCTATCTTTTGAATCGACCCATTGTTGGACAGAATTTCGTTCTTC 1986 Query 130703 ATACTTTTATCGTACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATT 130762 || ||| |||| || | | ||||| | | || ||| | || | | Sbjct 1987 ATGTCGAGATCCCACAAGCCCATGTTAGTTAGATCCTGCAGCAGATGGTGGTTCACCACC 2046 Query 130763 TGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGAT 130822 || || || || | ||| ||||| || ||||| ||| ||| |||| || || ||| Sbjct 2047 TGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGATGTGTACGGCTCGAACGAT 2106 Query 130823 TCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAA 130882 || || ||||||| ||||| || || | || || ||||| |||| | | || Sbjct 2107 TCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCATCGGAGCCAACAGCAACGAG 2166 Query 130883 TTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTA 130942 || || | ||||||| ||| || ||| |||||| || |||| | |||||||| ||| Sbjct 2167 TTGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGCCCAGTTCCATAGAGTCGTA 2226 Query 130943 GGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGATTCG 131002 || | | ||||||||||| || | || || |||||||| || | || ||| ||| Sbjct 2227 GGCT---CCTTGTTCCACATCTCGTACTGCAGGATGCCTTTGCTTACCGGGCTGCCCTCG 2283 Query 131003 AACGATTCGTAGATTCCTTCGACACGA---GCCAGGTCGTTGCTAGCTTCCAAAGCTCCG 131059 ||| |||||| ||| | ||||| |||| ||| ||||||||||| ||||| Sbjct 2284 TACGTTTCGTACGGTCCAT---CACGAGCGGCCAACTCGCAGCTAGCTTCCAGCGCTCCA 2340 Query 131060 TAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGA 131119 || || ||||||||| || |||| || | || || || | | ||| ||||| ||| Sbjct 2341 TAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTGAGCCTCCTCGCTTTCGTACGGA 2400 Query 131120 AATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATGT 131179 | ||| || || || || || || | ||||| | || | ||| | ||||| || Sbjct 2401 TAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGCCGATGGGTCTGTGG 2460 Query 131180 TTTAAATTACATTTACGC-GAACATTCGG--TGGGATAAAGGTTAATGTCAATTATTTTG 131236 | || | ||| | | | ||| || || ||||| |||||| |||||| Sbjct 2461 CGCATGTTGGA---GCGCTTAGCCTCCGGCACAGGGTAGTAGTTAACGTCAATGATTTTG 2517 Query 131237 TTTAAATTGCGCACTACAATTTGTGTGACGCTT--TTCAATTTGTCGAAATCAAACGTGC 131294 || | |||||| || |||| || | | ||| |||| || | ||||| |||| Sbjct 2518 TTCAGATTGCGTGTCACTATTT-TG-GCCACTTCCTTCAGCTTAGCAAAATCGTACGT-- 2573 Query 131295 CAGTTTCGAGGTTTAC-AAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTT 131353 | || | ||||| || || | | || || || || ||||| || || || || Sbjct 2574 -TTTGTCCTGCTTTACGAACATGTTCAGCGCA-ATCGAGGCTAGATTGCACACCGCTATT 2631 Query 131354 TCGTCATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCC 131413 ||||| | | |||| ||||| |||| ||||| || | ||| |||||||| Sbjct 2632 TCGTCCTTGGACGAGTACTCCACAATCTCGGTGCACAGGTTGGAACACTTGATGGTGCCA 2691 Query 131414 AAATTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCC 131472 | || || |||||||| ||| ||| ||| | |||||||||| |||||| || || Sbjct 2692 ATGTTCTGCTGATTGCTCTTACGATT-ACACGCATCCTTGTACAGCATGTACGGTACACC 2750 Query 131473 CGTTTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTGATAT 131530 |||||| || || | || || | || | || | || | | || || || Sbjct 2751 CGTTTCAACCTGCGACTCGATGA--TAGCAAACCATAGGTCCTGCGCCTTCACCTGTCGA 2808 Query 131531 TTGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAA 131590 | | | || || ||||| ||||| | | || || | || ||| ||||| Sbjct 2809 ATAAAGCGACCCTCCTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCACGAA 2868 Query 131591 CTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACT 131650 | |||| |||||| ||| |||||||| || ||||| ||||| || || Sbjct 2869 TCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACATTTCGTTCGCCTCGACA 2928 Query 131651 CGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCT 131710 |||||||| |||| |||||| | ||| | ||||| |||| || | ||| |||| Sbjct 2929 CGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTCCCGGGCTCGCACCTCT 2988 Query 131711 TCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCC 131770 ||| | || | |||| || | || | ||| || || || || | ||||| || || Sbjct 2989 TCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATATATCTCCGTGCCACGGCTCG 3048 Query 131771 AAATACACTGCCATTGCGCC------TTTGCGCTTACCGCCTTGATTAACATGACGAACC 131824 | ||| | || | || || |||| || || || || | |||| || || Sbjct 3049 AGATAGATAGCGAACGCTCCAGGCCGTTTG---TTGCCACCCTGGTCGACATACCGTGCC 3105 Query 131825 ATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTA 131884 | |||||||| ||||||||||| ||| ||| ||||| | |||| || || | Sbjct 3106 GTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCCGTTCGTACCAGAT 3165 Query 131885 ATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTA 131944 ||||| | || || || | ||| ||| ||||| || |||||||| ||| | |||| Sbjct 3166 ATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGGCCAATACCACCGGCAGATTTG 3225 Query 131945 GAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATG 132004 || || || || || | | || || | |||||||| || | ||||| ||| ||| Sbjct 3226 GAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGATACTGTCATCGGACATG 3285 Query 132005 TCGACTAAAAAGCAAGAGGACAACTG 132030 | | ||| || || |||| ||| Sbjct 3286 GTCAGCAGAAAACAGGAAGACAGCTG 3311 >seq2452 Length=1332465 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| || | |||||||| | || || || || || || ||||| ||| | Sbjct 203866 CCACCGCGCAGGCGAAGCACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGAC 203925 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || || ||||| || ||||| |||| ||||||||||||||||| || Sbjct 203926 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGA 203985 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| |||||| |||| |||| | || || | || || || Sbjct 203986 ATTCCCTCCTTATCCTGGATCTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTCGACC 204045 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || ||||| || ||||| || ||||| ||||| Sbjct 204046 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 204092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424920556832376