Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2523 98.7 1e-15 >seq2523 Length=22734 Score = 98.7 bits (108), Expect = 1e-15 Identities = 130/175 (74%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 182697 TTACCGCGAAGTGGGAACACACCGTA-GTGATCACGACCAACGACAGAGAGACCCGCAAC 182755 |||||||| || || ||||||||||| ||| |||||||| || ||| || || | || Sbjct 17312 TTACCGCGCAGCGGAAACACACCGTACGTG-TCACGACCGACCACACCCAGCCCGGACAC 17254 Query 182756 CGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTT-TCCAGATTGTG 182814 ||||| ||||| || || || ||||| || | ||||| ||||| || | |||| | Sbjct 17253 GGCGAGCGTTTTGGCTGAGTCTCCCTCGGTAAGGATGAGCGTACAGTTGAGCGAATTGCG 17194 Query 182815 CCGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACCGGTAATTTTGGACTT 182869 || ||| || | ||| ||||| |||| |||||| ||||| | || |||||||| Sbjct 17193 -CGAACCGGCATCGTTGGCGTCCTCCAGCTTGGGGATACCCTTGATCTTGGACTT 17140 Score = 91.5 bits (100), Expect = 2e-13 Identities = 236/356 (66%), Gaps = 8/356 (2%) Strand=Plus/Minus Query 181624 AACCCGTACCGATACCCTCGGTTCCATTCACGAGAACCATTGGTAAAGTTGGCATGTAAA 181683 |||| ||||||||||| || | || || || || ||||| |||| | |||| || Sbjct 18427 AACCGGTACCGATACCTTCCGCACCGTTGACCAGCACCATCGGTATGATCGGCAGATACC 18368 Query 181684 AGTCTGGTTCAATGGAGCGTCCATCATCGTCCAAGTAGTTGAGGATCGGGTCATCCCGAG 181743 || | ||||| ||| | |||||| || ||| | | | || || ||| | | Sbjct 18367 AGACAGGTTCGATGCGCAGATTGTCATCGACCTGGTACTCTAACAGTGGATCGTCCAGCG 18308 Query 181744 GATCAAAGATCTTGCGAGCCTCCTTGGTAAGTTTTGTGAAGATATACCTCGTTTGAGAAG 181803 ||| ||||| | || | | || ||| |||||||||| ||||| | || | Sbjct 18307 GATGGAAGATGTGTCGCGTCAGGGCGGAAAGCATTGTGAAGATGTACCTAG---GACTGG 18251 Query 181804 C---GTCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAA 181860 | ||| || || ||| | || |||||||| || ||||||| || | || || || | Sbjct 18250 CGCTGTCCTTGCCGCCCGTCAGGCGCGTACCGAACTGACCACCCGGATACAGCAGATTGA 18191 Query 181861 TGTTGTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCCGCA-AGGGACACT 181919 ||||||| ||| || | | |||| || ||||| || ||| || ||||| Sbjct 18190 TGTTGTTGCTACCAACGTAATTCTGCGCCAGGTTGACGATCGT-GGAGCAGAGCGACACC 18132 Query 181920 TCACCGTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTT 181975 |||||||| ||||| || ||||| ||||| || | | |||| ||| |||||||| Sbjct 18131 TCACCGTGATGGTAGGCGGACTTTTCCGCCACCGAACCTGCCAGCTGGGCCACCTT 18076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628011015880800