Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2452 150 5e-31 seq147 150 5e-31 seq2453 116 1e-20 seq890 93.3 1e-13 seq2251 91.5 4e-13 seq1944 91.5 4e-13 seq2341 89.7 2e-12 seq2319 87.8 5e-12 seq2231 87.8 5e-12 seq1964 87.8 5e-12 seq1928 87.8 5e-12 seq1147 87.8 5e-12 >seq2452 Length=1332465 Score = 150 bits (166), Expect = 5e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 |||||| || | | || || | |||||| || ||||| || || || || ||||| || Sbjct 203865 ACCACCGCGCAGGCGAAGCACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGA 203924 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| || || || || || ||||| || ||||| || ||||| ||||| Sbjct 203925 CAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGG 203984 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 |||||| || |||||||| || || || || ||||| || |||| ||| || || || || Sbjct 203985 AATTCCCTCCTTATCCTGGATCTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTCGAC 204044 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| |||| ||||| || || || ||||| || || |||||||| Sbjct 204045 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 204092 Score = 91.5 bits (100), Expect = 4e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 235880 TTCAATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACC 235939 ||||| || |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||| Sbjct 1126939 TTCAACATCAGGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACC 1126998 Query 235940 GGGATCAAAACCCAGCATCTCCA 235962 |||||| | |||| ||||||||| Sbjct 1126999 GGGATCGATACCCGGCATCTCCA 1127021 >seq147 Length=443619 Score = 150 bits (166), Expect = 5e-31 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 140505 TACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAA 140564 ||| |||| ||||| | || || || |||||||| || || || || || || || ||| Sbjct 111931 TACTTACCTCCACGAAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAA 111872 Query 140565 TCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCA 140624 ||||| | || || ||||| || || || || || || ||||| || || |||||||| Sbjct 111871 TCAGAGAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGATCT 111812 Query 140625 GGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 || ||||| ||||| || ||||| || || || || ||||| || |||| || || || Sbjct 111811 GGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGC 111752 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || ||||| | ||||| || || || ||||| || ||||||||||| Sbjct 111751 TCGACCTCGAGTGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 111699 >seq2453 Length=595837 Score = 116 bits (128), Expect = 1e-20 Identities = 241/358 (67%), Gaps = 3/358 (1%) Strand=Plus/Plus Query 349531 ACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTT 349590 ||| ||||| || || | ||||| | | || |||||||||| |||||||| || | Sbjct 536661 ACCGGAAGAGATCTCCGCCATGGTGCTGGGCAAGATGAAGGAAACGGCTGAAGCGTACCT 536720 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || | | || || |||| ||| | |||||||| ||||| ||||| ||||| || || Sbjct 536721 GGGCAAGAAGGTGACCCATGCGGTTGTCACTGTACCGGCCTACTTTAACGATGCGCAACG 536780 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 | ||||| || ||||| || | |||||||| | || | | || || || || Sbjct 536781 TCAGGCAACGAAGGATGCGGGAACAATTGCGGGCCTGGTGGTGATGCGTATCATCAACGA 536840 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTAT 349770 ||| || ||||| || || || || ||||| || || | | ||| || || || | Sbjct 536841 ACCGACCGCTGCGGCCATCGCTTACGGGCTGGACAAGAAG---GACGGTGAGAAGAACGT 536897 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 || | || ||| | || ||||||||||| || || || || || || | || | || Sbjct 536898 GCTGGTGTTCGATCTGGGCGGTGGTACTTTCGACGTGTCGCTGCTGACCATCGATAACGG 536957 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 | || || || || || ||||| || ||||| ||||| |||||||| ||| Sbjct 536958 TGTGTTCGAGGTGGTGGCCACGAACGGTGACACCCATCTCGGTGGCGAAGATTTCGAT 537015 Score = 86.0 bits (94), Expect = 2e-11 Identities = 145/207 (70%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || |||||| | || || || || || || || | ||| | | || | || || ||| Sbjct 536335 GGTATCGATCTCGGCACCACCTACTCCTGCGTCGGTGTGTACAAGAACGGACGGGTGGAA 536394 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC---CGAA 349321 || ||||| || || || |||||| | | ||||| || ||||| ||||| || ||| Sbjct 536395 ATCATTGCCAACGACCAGGGTAACCGTATTACGCCCTCGTACGTGGCATTCACGGCCGAT 536454 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTG-CTGCTAATCCAAAAAATAC 349380 |||||| ||||||||||| | || || || | ||||| | | || || |||| || Sbjct 536455 GGCGAGCGTCTGATTGGTGATGCCGCCAAGAA-CCAGCTGACGACCAACCCGGAAAACAC 536513 Query 349381 GGTTTTTGATGCTAAGCGACTTATTGG 349407 || || ||||| ||||| || ||||| Sbjct 536514 CGTGTTCGATGCGAAGCGTCTGATTGG 536540 >seq890 Length=1089215 Score = 93.3 bits (102), Expect = 1e-13 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 140625 GGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 || || || || || || |||||||| || || || || || ||||||| ||| |||||| Sbjct 223804 GGTGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTCTCAATCGTATCCGATGGT 223745 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || || | ||||||||||| || ||||| || |||||||||||| Sbjct 223744 TCGACCTCCAGCGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCATT 223691 >seq2251 Length=67329 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| |||||||||||||||||||||| | | Sbjct 26754 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACCGGGATCGATA 26695 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 26694 CCCGGCATCTCCA 26682 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 24646 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 24587 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 24586 CCCGGCATCTCCA 24574 >seq1944 Length=188785 Score = 91.5 bits (100), Expect = 4e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 171041 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 171100 Query 235950 CCCAGCATCTCCATACAA 235967 ||| ||||||||| |||| Sbjct 171101 CCCGGCATCTCCAGACAA 171118 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 173090 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 173031 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 173030 CCCGGCATCTCCA 173018 >seq2341 Length=1506246 Score = 89.7 bits (98), Expect = 2e-12 Identities = 73/86 (85%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 235877 TCGTTCAATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGT 235936 || ||||| | |||||| ||||| ||| ||||||| ||||||||| ||||| ||||||| Sbjct 570373 TCTTTCAACA-AGGGGG-TGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGT 570316 Query 235937 ACCGGGATCAAAACCCAGCATCTCCA 235962 || |||||| | |||||||||||||| Sbjct 570315 ACTGGGATCGATACCCAGCATCTCCA 570290 >seq2319 Length=664866 Score = 87.8 bits (96), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 32659 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 32600 Query 235950 CCCAGCATCTCCATAC 235965 ||| ||||||||| || Sbjct 32599 CCCGGCATCTCCAAAC 32584 >seq2231 Length=698629 Score = 87.8 bits (96), Expect = 5e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 501598 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 501657 Query 235950 CCCAGCATCTCCATAC 235965 ||| ||||||||| || Sbjct 501658 CCCGGCATCTCCAAAC 501673 >seq1964 Length=845256 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 440191 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 440132 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 440131 CCCGGCATCTCCA 440119 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 453542 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 453483 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 453482 CCCGGCATCTCCA 453470 >seq1928 Length=179416 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 27559 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 27500 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 27499 CCCGGCATCTCCA 27487 >seq1147 Length=299147 Score = 87.8 bits (96), Expect = 5e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949 |||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | | Sbjct 185454 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 185513 Query 235950 CCCAGCATCTCCA 235962 ||| ||||||||| Sbjct 185514 CCCGGCATCTCCA 185526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515202505851419