Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1391 233 2e-56 seq2119 91.5 2e-13 >seq1391 Length=279726 Score = 233 bits (258), Expect = 2e-56 Identities = 1118/1752 (64%), Gaps = 54/1752 (3%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || ||||| ||||||||||| || || | ||| ||||||| ||||| | || || | Sbjct 1729 GTGCGCAAGTAGTACATGCCAGTTTTCAATCCCATCTTCCAACCGTAAAAATGGATCGAC 1788 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCC-ATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | ||||||| ||| | | || || | | | ||||||| ||| || ||||| ||||| Sbjct 1789 GTCAGCTTG-CCATAGTTTGGCTCGGCGACGTGAATGTTGAACGATTGCGACTGATCGAT 1847 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGT 78368 |||| || || || || ||||| | |||| || || || |||||||||| || Sbjct 1848 AAACGCTCCCCGATCCGCTGCCATTTTGATGCACGTTTTCACCGATATCTCCCAGACCGT 1907 Query 78369 CCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCC---AGCGCTTGTACGCTCCCACCGGC 78425 ||| | | | | || | | | || || | | ||| | |||| | Sbjct 1908 TTTGTACAGGTCGCGTATTTCCTGCGGTATAGCCTCTATCTTTTGAATCGACCCATTGTT 1967 Query 78426 TCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGGAC 78485 || |||||| ||||| || | | | ||| || || |||||| | | Sbjct 1968 GGACAGAATTTCGTTCTTCATGTCGAGATCCCACAAGCCCATGTTAGTTAGATCCTGCAG 2027 Query 78486 CAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGT 78545 ||| || |||| | || ||||||||| | ||| || | ||| | ||| | Sbjct 2028 CAGATGGTGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTGTTGTAAACGTTCGA 2087 Query 78546 CGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCAT 78605 |||||||||||||| | || || || || | ||| ||||| ||||| || |||||||| Sbjct 2088 TGTGTACGGCTCGAACGATTCATTATTGCCGAGGATTTGGGCAGTCGAAGCCGTCGGCAT 2147 Query 78606 GGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCCGTC 78665 || || | ||| | || || || | ||| ||| || |||| |||| | | | Sbjct 2148 CGGAGCCAACAGCAACGAGTTGCGGATACCGTGCTTCGCAATCTTTTCCTTCAACTCTGC 2207 Query 78666 CCAAA---ATTCATTCGCCGCGATCCC----CCACATGTCCGGTTGAAGGATACCCTCGG 78718 ||| || | ||| | | ||| |||||| || || ||||| || | | Sbjct 2208 CCAGTTCCATAGAGTCGTAG-GCTCCTTGTTCCACATCTCGTACTGCAGGATGCCTTTGC 2266 Query 78719 ACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACT 78778 |||| |||| | |||| ||||| | ||| || ||| | ||||| Sbjct 2267 TTACCGGGCTGCCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCGCAGCTAG 2326 Query 78779 CGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGG 78838 | ||| || | | ||| | | ||||| || | ||| || | | |||| Sbjct 2327 CTTCCAGCGCTCCATAGTAGATGGTTTCGAATATCTGTTGGTTCAGTTTTTGAGCCTC-- 2384 Query 78839 TCTCG---TCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGA 78895 |||| ||| ||| | || | || ||||| ||||||||| |||||| || |||| Sbjct 2385 -CTCGCTTTCGTACGGATAGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGA 2443 Query 78896 TAGCGATCGGTCGGTGGCGCATGTTG---CTCTTTCGGGCCGCCTCGGTC---GGGTAAA 78949 | |||| |||| ||||||||||||| | ||| ||||| | | ||||| Sbjct 2444 TGCCGATGGGTCTGTGGCGCATGTTGGAGCGCTTA------GCCTCCGGCACAGGGTAGT 2497 Query 78950 AGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATT 79009 |||| || |||| |||||| || || || || | | ||| || | || | Sbjct 2498 AGTTAACGTCAATGATTTTGTTCAGATTGCGTGTCACTATTTTGGCCACTTCCTTCAGCT 2557 Query 79010 TGGCGAAATCAAAATGATT-TCCT--TTGATGAAAGTCGGTAG-GCACAGCGATGCCAGG 79065 | || ||||| | || |||| || | ||| | || ||| | ||| || || Sbjct 2558 TAGCAAAATCGTACGTTTTGTCCTGCTTTACGAACATGTTCAGCGCA-ATCGAGGCTAGA 2616 Query 79066 TTGCACACGGCCGTCTCGTCC--GGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAG 79123 |||||||| || | |||||| || | || | ||| | || || ||||||| || | Sbjct 2617 TTGCACACCGCTATTTCGTCCTTGGACGAGTA--CTCCACAATCTCGGTGCACAGGTTGG 2674 Query 79124 ACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGC 79183 | ||||||||||||| ||||||| ||| |||||||| ||||| || |||||||| Sbjct 2675 AACACTTGATGGTGCCAATGTTCTGCTGATTGCTCTTACGATTACACGCATCCTTGTACA 2734 Query 79184 ACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGG 79243 ||||||||| || || |||||||| || || | | ||| | |||| | | Sbjct 2735 GCATGTACGGTACACCCGTTTCAACCTGCGACTCGATGATAGCAAACCATAGGTCCTGCG 2794 Query 79244 CCCGGACAACCTTCTTGTAC--CGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAA 79301 || || | || || ||||||| ||||| | ||||| || | ||| Sbjct 2795 CCTTCAC--CTGTCGAATAAAGCGACCCTCCTTCTCGTACCCCGTGTACAGCTTCTCGAA 2852 Query 79302 AGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTC 79361 | || || | ||||| || || || || |||||||| |||||||| ||| Sbjct 2853 CTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGACACATCAGACTCCACAT 2912 Query 79362 CTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTC 79421 |||| | ||| || || |||||| || ||||| ||||| ||||| || | ||| Sbjct 2913 TTCGTTCGCCTCGACACGCTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTC 2972 Query 79422 GCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTC 79481 ||| |||| ||| || | ||| ||| || |||||||| || | || || Sbjct 2973 CCGGGCTCGCACCTCTTCTTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATATATC 3032 Query 79482 GGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTT 79541 ||||||||||||| |||||||| ||||||| || || ||| ||| ||||||| Sbjct 3033 TCCGTGCCACGGCTCGAGATAGATAGCGAACGCTCCAGGCCGTTTGTTGCCACCCTGGTC 3092 Query 79542 GACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCC 79601 ||| ||||| ||||| |||||| | || || | ||| ||||| | |||| | | || Sbjct 3093 GACATACCGTGCCGTATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCC 3152 Query 79602 GTTCGTCCCGTTGATTCGT--GTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGAT 79658 |||||| || ||| || || || |||| || ||| | ||| || | || || Sbjct 3153 GTTCGTACC--AGATATGTACGTTCCCTTCGCGCGGATG-CAGTGCACGTTCAGGCCAAT 3209 Query 79659 GCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGAT 79718 || |||| | ||||| || | || |||| ||||||||| |||||||| |||||||| Sbjct 3210 ACCACCGGCAGATTTGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGAT 3269 Query 79719 CGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGC 79778 ||| || ||| | | ||| || ||| |||| ||| || | ||| | || Sbjct 3270 ACTGTCATCGGACATGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTGGCCGC 3329 Query 79779 GTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTC 79838 || | |||||| | || || |||||| | | | || ||||| |||||| || Sbjct 3330 CGCAAACATGGTCGGTGAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGTACGTTTC 3389 Query 79839 CTTGACGC-GC-GGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTAC 79896 | ||| || || ||| ||||||||||| |||| ||||||||||| | | || | Sbjct 3390 GAT--CGCTGCATCGATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCATGTGC 3447 Query 79897 TGGGGCGTCTCG 79908 || ||| |||| Sbjct 3448 TGTGGCCGCTCG 3459 Score = 199 bits (220), Expect = 4e-46 Identities = 1118/1760 (64%), Gaps = 80/1760 (5%) Strand=Plus/Minus Query 19102 GCCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTC----CCGC 19157 ||| ||| || | | ||||| ||||| |||| ||||| ||||| ||| || | || Sbjct 3453 GCCACAGCACATGCTGATGCGCGTCGCCATCGGTATCCACGGCGAAGACATCGATGCAGC 3394 Query 19158 GAGTCCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCC 19217 || ||| || ||| | ||| || | || | |||||| || || | |||||| Sbjct 3393 GAT----CGAAACGTACAATCTGCTGTCCGAGCGCTACTTCACCCATGCTTCACCGACCA 3338 Query 19218 TTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGG 19277 | || || | ||| | || ||| |||| |||||| || || | ||| | Sbjct 3337 TGTTTGCGGCGGCCACGCAGCGGCCCCAGCTGTCTTCCTGTTTTCTGCTGACCATGTCCG 3278 Query 19278 ATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGT 19337 ||||||| || ||||| |||||||| ||||||||| |||| || | || ||||| | Sbjct 3277 ATGACAGTATCGAGGGTATCTACGATACGCTCAAGCAGTGTGCCCTTATTTCCAAATCTG 3218 Query 19338 CCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTAC--ACGAATCAATG 19394 |||| ||||| || | || ||| | ||||| ||| || || || ||| || Sbjct 3217 CCGGTGGTATTGGCCTGAACGTGCACTGC-ATCCGCGCGAAGGGAACGTACATATC--TG 3161 Query 19395 GGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCA 19454 | ||||||||| | | |||| | || || ||| | ||||| | |||||| ||||| Sbjct 3160 GTACGAACGGAATTTCAAACGGACTGGTGCCGATGTTGCGCGTGTACAACAATACGGCAC 3101 Query 19455 GGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCAT 19514 |||| ||| ||||||| ||| |||||| || ||||||| ||||| |||||||| | Sbjct 3100 GGTATGTCGACCAGGGTGGCAACAAACGGCCTGGAGCGTTCGCTATCTATCTCGAGCCGT 3041 Query 19515 GGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGC 19574 |||||| || | | || || ||||| || ||| || | || ||| ||| Sbjct 3040 GGCACGGAGATATATTCGAGTTTCTCGATCTTAAGAAAAACACCGGCAAAGAAGAGGTGC 2981 Query 19575 GCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGA 19634 | || ||| | || ||| | ||||| ||||| || |||||| || || ||| Sbjct 2980 GAGCCCGGGACATGTTTTACGCCCTCTGGATACCGGATCTGTTCATGAAGCGTGTCGAGG 2921 Query 19635 AGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACG 19694 | ||||| ||| |||||||| |||||||| || || || | |||| | | Sbjct 2920 CGAACGAAATGTGGAGTCTGATGTGTCCGCACGACTGTCCCGGATTGGCCGATTCGTGGG 2861 Query 19695 GCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAA--GA-AGG 19751 |||| | |||| | || ||||| | |||| |||| || || | || ||| Sbjct 2860 GCGAAGAGTTCGAGAAGCTGTACACGGGGTACGAGAAGGAGGGTCGCTTTATTCGACAGG 2801 Query 19752 TGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACAC 19811 || ||| | |||| | ||| || || | ||||| || || || || Sbjct 2800 TGAA---GGCGCAGGACCTATGGTTTGCTATCATCGAGTCGCAGGTTGAAACGGGTGTAC 2744 Query 19812 CGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGA 19871 |||||||| |||||||| || || ||| |||||| ||||||| ||| | | Sbjct 2743 CGTACATGCTGTACAAGGATGCGTGTAATCGTAAGAGCAATCAGCAGAACATTGGCACCA 2684 Query 19872 TCAAGTCGTCCAACCTGTGTACTGAAATCATGGAG---GTTTCCAAGCCGGACGAGACTG 19928 |||||| ||||||||||| || || || ||||| ||||| |||||| | | Sbjct 2683 TCAAGTGTTCCAACCTGTGCACCGAGATTGTGGAGTACTCGTCCAA---GGACGAAATAG 2627 Query 19929 CCGTGTGTAATCTGGCGTCCCTGTGC-CTGCCGACTTTCGTCA---AGGCCTCCTCCTTC 19984 | ||||| ||||| || || | ||| ||| | ||||| | ||| | | | | Sbjct 2626 CGGTGTGCAATCTAGCCTCGAT-TGCGCTGAACATGTTCGTAAAGCAGGACAAAACGTAC 2568 Query 19985 GACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATC 20044 || ||||| || || | || ||| || | || || || |||||||| |||| Sbjct 2567 GATTTTGCTAAGCTGAAGGAAGTGGCCAAAATAGTGACACGCAATCTGAACAAAATCATT 2508 Query 20045 GATCGGAACTTTTACCC---GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCG 20101 || |||| ||||| | | ||||| |||| || || ||||||||| | || Sbjct 2507 GACGTTAACTACTACCCTGTGCCGGAGGCTAAGCGC---TCCAACATGCGCCACAGACCC 2451 Query 20102 ATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGAC 20161 |||| ||||| || |||||| ||||||| | ||||| || | || | | ||| Sbjct 2450 ATCGGCATCGGTGTGCAGGGCATGGCCGATGCGTTCATCTTGATGCGCTATCCGTACGA- 2392 Query 20162 GATCCCA--AGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC 20219 | | | |||| | | || ||| | || ||||| || | ||| | | || Sbjct 2391 -AAGCGAGGAGGCTCAAAAACTGAACCAACAGATATTCGAAACCATCTACTATGGAGC-- 2335 Query 20220 TCCTGGAATC---GTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGT 20276 |||||| | ||||| | ||| || || |||||||| |||| | | ||| Sbjct 2334 -GCTGGAAGCTAGCTGCGAGTTGGCCGCTCGTGATGGACCGTACGAAACGTACGA-GGGC 2277 Query 20277 CGCCCGCGT--CCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAG--AATGAG 20332 ||||| || | | || ||||| ||| || |||||| || ||| | || Sbjct 2276 AGCCCG-GTAAGCAAAGGCATCCTGCAGTACGAGATGTGG---AACAAGGAGCCTACGAC 2221 Query 20333 T-TTTGGAGC------GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTT 20385 | | |||| | | | |||| |||| || ||||| | ||||||||||| Sbjct 2220 TCTATGGAACTGGGCAGAGTTGAAGGAAAAGATTGCGAAGCACGGTATCCGCAACTCGTT 2161 Query 20386 GCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTT 20445 ||| | || || |||||||| || ||||| ||||| ||| | || || || || | || Sbjct 2160 GCTGTTGGCTCCGATGCCGACGGCTTCGACTGCCCAAATCCTCGGCAATAATGAATCGTT 2101 Query 20446 CGAGCCGTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGT 20505 |||||||||||| | ||| | ||| | || ||| | || |||||| |||| Sbjct 2100 CGAGCCGTACACATCGAACGTTTACAACAGGCGCGTGCTGTCGGGCGAGTTCCAGGTGGT 2041 Query 20506 AAACAAGCACCTGGTCCGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAA 20565 ||| | || ||| | | || | || || | ||||| | | | || ||||| Sbjct 2040 GAACCACCATCTGCTGCAGGATCTAACTAACATGGGCTTGTGGGATCTCGACATGAAGAA 1981 Query 20566 TGAAAT--TGTCCGAGCCGGCGGGAGCGTC--CAGGCATTGGATATCCCCCAGAACCTCA 20621 ||||| ||||| | | || | || || | || ||| || ||| | | Sbjct 1980 CGAAATTCTGTCC-AACAATGGGTCGATTCAAAAGATAGAGGCTATACCGCAGGAAATAC 1922 Query 20622 AGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCG 20681 ||| | |||| || || ||||| || | ||| | |||| | ||||| || | Sbjct 1921 GCGACCTGTACAAAACGGTCTGGGAGATATCGGTGAAAACGTGCATCAAAATGGCAGCGG 1862 Query 20682 ATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCC 20741 |||| || || | ||||| ||||| || ||| |||| |||| | | ||||||| Sbjct 1861 ATCGGGGAGCGTTTATCGATCAGTCGCAATCGTTCAA--CATTCACGTCG---CCGAGCC 1807 Query 20742 ------TGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGG 20795 |||| ||||||| || || ||| | ||||| ||| | | ||| | || || | Sbjct 1806 AAACTATGGC-AAGCTGACGTCGATCCATTTTTACGGTTGGAAGATGGGATTGAAAACTG 1748 Query 20796 GCATGTACTATCTGCGGACC 20815 |||||||||| |||| ||| Sbjct 1747 GCATGTACTACTTGCGCACC 1728 >seq2119 Length=1501809 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 59991 GCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTC 60050 || ||||| ||| ||||| ||||||||| ||| ||| | | || |||||||| Sbjct 1235136 GCGTTTGCCGCCGTTGAAGGTATCTTCTTCAGTGGAAGCTTCGCTTCAATCTTCTGGCTG 1235077 Query 60051 AAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAG 60110 || ||||||||||| ||||| || || | ||||| |||||||||||||| || ||||| Sbjct 1235076 AAGAAGCGTGGCCTGATGCCTGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAA 1235017 Query 60111 GGCCTCCA 60118 || || || Sbjct 1235016 GGGCTACA 1235009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548506472415120