Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1391 210 2e-49 seq2523 143 3e-29 seq1920 141 1e-28 seq2119 82.4 8e-11 >seq1391 Length=279726 Score = 210 bits (232), Expect = 2e-49 Identities = 514/767 (67%), Gaps = 18/767 (2%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTAC-ACGC-GTGTCCGTGAGACGTACG 53252 |||||||||||| | ||||||||||| || ||| | | || | | || | |||||| Sbjct 3437 ATGCGCGTCGCCATCGGTATCCACGGCGAAGACATCGATGCAGCGATCG--AAACGTACA 3380 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 | | || | | ||||| || || || | || ||| |||| || | ||| Sbjct 3379 ATCTGCTGTCCGAGCGCTACTTCACCCATGCTTCACCGACCATGTTTGCGGCGGCCACGC 3320 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 | | || ||| |||| ||| || ||| || | ||| |||||| ||||| || | Sbjct 3319 AGCGGCCCCAGCTGTCTTCCTGTTTTCTGCTGACCATGTCCGATGACAGTATCGAGGGTA 3260 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| ||||||||| ||||||||| || ||||| | | |||||||| || | Sbjct 3259 TCTACGATACGCTCAAGCAGTGTGCCCTTATTTCCAAATCTGCCGGTGGTATTGGCCTGA 3200 Query 53433 AC-TGCTCGAACGTCCGTGCGAACGGCAC--ACCAATCAAGGGGACGAACGGCGTCGCCG 53489 || ||| | | |||| ||||| || || || ||| || |||||||| | | Sbjct 3199 ACGTGCACTG-CATCCGCGCGAAGGGAACGTACATATCT--GGTACGAACGGAATTTCAA 3143 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 | ||| | ||||| ||| | ||||| | |||||| ||||| ||||| ||| ||||||||| Sbjct 3142 ACGGACTGGTGCCGATGTTGCGCGTGTACAACAATACGGCACGGTATGTCGACCAGGGTG 3083 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | || || || ||||||| ||||| |||||||||||||||| || || | | Sbjct 3082 GCAACAAACGGCCTGGAGCGTTCGCTATCTATCTCGAGCCGTGGCACGGAGATATATTCG 3023 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCA---GGGTGACGAAGAGATGCGCTGCCGTGACCTGT 53666 |||||||||| || | ||| | || | |||||| |||| ||| ||| ||| Sbjct 3022 AGTTTCTCGATCT---TAAGAAAAACACCGGCAAAGAAGAGGTGCGAGCCCGGGACATGT 2966 Query 53667 TTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGT 53726 || || || ||||| ||||| || |||||| | || ||| | |||| |||| Sbjct 2965 TTTACGCCCTCTGGATACCGGATCTGTTCATGAAGCGTGTCGAGGCGAACGAAATGTGGA 2906 Query 53727 ACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACG 53786 |||||||| ||| |||| || ||||| | | | | || || ||||| | Sbjct 2905 GTCTGATGTGTCCGCACGACTGTCCCGGATTGGCCGATTCGTGGGGCGAAGAGTTCGAGA 2846 Query 53787 AGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGG 53846 || |||| | ||||| |||| |||| | |||| ||||||| || Sbjct 2845 AGCTGTACACGGGGTACGAGAAGGAGGGTCGCTTTATTCGACAGGTGAAGGCGCAGGACC 2786 Query 53847 TATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGG 53906 ||||| ||| ||| || || ||||| || ||||| ||||||||| ||||||| Sbjct 2785 TATGGTTTGCTATCATCGAGTCGCAGGTTGAAACGGGTGTACCGTACATGCTGTACAAGG 2726 Query 53907 ATTCG-GTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 || || || | || |||||||| ||| ||||||| ||| |||||| Sbjct 2725 ATGCGTGTAATCG-TAAGAGCAATCAGCAGAACATTGGCACCATCAA 2680 >seq2523 Length=22734 Score = 143 bits (158), Expect = 3e-29 Identities = 284/417 (68%), Gaps = 9/417 (2%) Strand=Plus/Minus Query 152742 CAGCTTCGGCCAGTACACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTC 152801 ||||| |||||||| | ||||| | ||| | | || ||||||||||| |||||||| Sbjct 17538 CAGCTCCGGCCAGTTCGTGTGGATAAAGTTAATCAGCAGCCCCTTGATGTGGGATCCGTC 17479 Query 152802 AAGATCCGCGTCGGTCATGATCATCAGACGACCGTAGCGCAGG----TCACGTAGTGACC 152857 ||||| |||||||||||||||| || ||||| || ||| || || Sbjct 17478 CTGATCCTGATCGGTCATGATCATCACCTTGCCATAGCGTAGCGTCTTCAGGTCGTCCAT 17419 Query 152858 CGT-AG--ACCTTTCCATGT--TGAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTC 152912 ||| || || | | | ||| || ||||| | ||||| | |||||| | |||| | Sbjct 17418 CGTTAGGTACTTCTTCTTGTACTGCAGCCCAATAATCTTGATCAGGTTGTTGATTTCCGC 17359 Query 152913 ATTATCGGTCACCTGTTTCACCGTGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGG 152972 || || | ||| || ||| || || || || || || ||| || || || || Sbjct 17358 GTTCTCCAGGATCTGCTTGTGCGTTGCTTCGCGCACGTTCAGCAACTTACCGCGCAGCGG 17299 Query 152973 AAACACGCCGAACGCGTTGCGGCCTACAACGCTCAGACCGGCAATAGCAAGGGCTTTCGC 153032 |||||| ||| ||| || || || || || | ||| |||| | || || | ||| || Sbjct 17298 AAACACACCGTACGTGTCACGACCGACCACACCCAGCCCGGACACGGCGAGCGTTTTGGC 17239 Query 153033 CGAGTCACCCTCGGTGATAATAAGCGTACAGTCGTGAGACCGATGAGTACCGGCCCAGTT 153092 ||||| |||||||| | || |||||||||| | | || | | |||||| ||| Sbjct 17238 TGAGTCTCCCTCGGTAAGGATGAGCGTACAGTTGAGCGAATTGCGCGAACCGGCATCGTT 17179 Query 153093 GGCGTCGTCAAGCTTGGGGATTCCCGTGATCCTGCTTTTCTTAGAGCCGTCGGTTTT 153149 |||||| || ||||||||||| ||| ||||| || || || |||||| ||||| Sbjct 17178 GGCGTCCTCCAGCTTGGGGATACCCTTGATCTTGGACTTTTTGGAGCCGGACGTTTT 17122 Score = 116 bits (128), Expect = 4e-21 Identities = 275/411 (67%), Gaps = 17/411 (4%) Strand=Plus/Minus Query 117977 AGCTGAGGCCAGTACACGTGGATCATGTTCAGCACGAGCCCCTTGATATGGGAACCGTCC 118036 |||| ||||||| | |||||| | ||| | || ||||||||||| ||||| |||||| Sbjct 17537 AGCTCCGGCCAGTTCGTGTGGATAAAGTTAATCAGCAGCCCCTTGATGTGGGATCCGTCC 17478 Query 118037 AGATCCGCATCGGTCATGATCATCAGGCGGCCGTACCGTA-AATCTCTCAGG-------G 118088 ||||| ||||||||||||||||| ||| || |||| ||| ||||| Sbjct 17477 TGATCCTGATCGGTCATGATCATCACCTTGCCATAGCGTAGCGTCT-TCAGGTCGTCCAT 17419 Query 118089 AGTTATAAACCTTACCATGT--TGGAGCCCGAGGATCTTTTTAAGGTTGGAAAATTCCTC 118146 |||| || | | ||| || ||||| | ||||| | |||||| | |||| | Sbjct 17418 CGTTAGGTACTTCTTCTTGTACTGCAGCCCAATAATCTTGATCAGGTTGTTGATTTCCGC 17359 Query 118147 ATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGG 118206 || ||| | ||| || || || || || ||||| || |||||| ||||| || Sbjct 17358 GTTCTCCAGGATCTGCTTGTGCGTTGCTTCGCGCACGTTCAGCAACTTACCGCGCAGCGG 17299 Query 118207 AAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGC 118266 |||||| || || ||||||| || || || | || |||| | || || | || || Sbjct 17298 AAACACACCGTACGTGTCACGACCGACCACACCCAGCCCGGACACGGCGAGCGTTTTGGC 17239 Query 118267 CGAGTCACCCTCGGTAATAATAAGAGTGCACTCG---GTGCTGCGATGAGTACCGGCCCA 118323 ||||| |||||||||| || || || || | | | ||| | | |||||| Sbjct 17238 TGAGTCTCCCTCGGTAAGGATGAGCGTACAGTTGAGCGAATTGC---GCGAACCGGCATC 17182 Query 118324 ATTAGCATCATCCAGCTTCGGAACGCCCGTAATGCGCGACTTTTTGGACCC 118374 || || || |||||||| || | ||| | || ||||||||||| || Sbjct 17181 GTTGGCGTCCTCCAGCTTGGGGATACCCTTGATCTTGGACTTTTTGGAGCC 17131 Score = 105 bits (116), Expect = 7e-18 Identities = 295/448 (66%), Gaps = 16/448 (4%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || |||||||| || ||||| || | ||| | |||||| | || || | || | Sbjct 18425 CCGGTACCGATACCTTCCGCACCGTTGACCAGCACCATCGGTATGATCGGCAGATACCAG 18366 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTC--CGTGACGTACTTGAGCACCGCATTGTCACTCG 117269 |||| || | ||||| ||| || | || ||||| | || | || ||| || Sbjct 18365 ACAGGTTCGATGCGCAGATTGTCATCGACCTG--GTACTCTAACAGTGGATCGTCCAGCG 18308 Query 117270 GATCGAATATGTTCTTGGTCCACGGTGCTAGGCGA-GTGAAAATGTAACGAGAGCTTGCA 117328 ||| ||| |||| ||| | || | | || ||||| ||||| | || || || Sbjct 18307 GATGGAAGATGTGTCGCGTC-AGGGCGGAAAGCATTGTGAAGATGTACCTAGGACTGGCG 18249 Query 117329 GCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGG 117388 |||||||| || | || ||||||||||| || |||| ||| | || || || | | Sbjct 18248 CTGTCCTTGCCGCCCGTCAGGCGCGTACCGAACTGACCACCCGGATACAGCAGATTGATG 18189 Query 117389 TTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCA 117448 |||||| || || | || || |||| |||||| ||||| ||| | ||||| Sbjct 18188 TTGTTGCTACCAACGTAATTCTGCGCCAGGTTGACGATCGTGGAGCAGAGCGACACCTCA 18129 Query 117449 CCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC- 117507 || || || || || | || |||||||| | || |||||||| |||||||| | || Sbjct 18128 CCGTGATGGTAGGCGGACTTTTCCGCCACCGAACCTGCCAGCTGGGCCACCTTTACCTCG 18069 Query 117508 ----TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCA 117563 || ||||| | ||||| ||||| | | ||| ||||| || | ||||||| Sbjct 18068 CGCTTGTCGTCACG-----CTTGAAGCAGGTGAACAGCACTTTGCGTTGGCCAGGCTTCA 18014 Query 117564 GACCATCCGCCACGTGAGGGATCGAACG 117591 | ||||| || | |||||||| || Sbjct 18013 GCCCATCGAGCATGCACGGGATCGAGCG 17986 Score = 104 bits (114), Expect = 3e-17 Identities = 239/355 (67%), Gaps = 10/355 (3%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 ||||||||||| || || |||||||||||||| | |||||| | || || || | Sbjct 18425 CCGGTACCGATACCTTCCGCACCGTTGACCAGCACCATCGGTATGATCGGCAGATACCAG 18366 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995 | || || | | || |||||| | | ||| | || | | || ||| |||| Sbjct 18365 ACAGGTTCGATGCGCAGATTGTCATCGACCTGGTACTCTAACAGTGGATCGTCCAGCGGA 18306 Query 151996 TCGAATATCCGTCGAGTCATAGGACTCAAACGC---GTGAAGATGTATCGGGAGCTGGCC 152052 | ||| || |||| |||| || | ||| || ||||||||||| | | ||||| Sbjct 18305 TGGAAGATGTGTCGCGTCA--GGGCGGAAA-GCATTGTGAAGATGTACCTAGGACTGGCG 18249 Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112 |||||||| || | ||| ||||| || ||||| ||| || | || || |||| | Sbjct 18248 CTGTCCTTGCCGCCCGTCAGGCGCGTACCGAACTGACCACCCGGATACAGCAGATTGATG 18189 Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGA--CTCGCTT 152170 |||||| || ||| ||||||| |||| || || |||||| ||||| | | | Sbjct 18188 TTGTTGCTACCAACGTAATTCTGCGCCAGGTTGACGATCGTG--GAGCAGAGCGACACCT 18131 Query 152171 CACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTT 152225 ||||||| || || || | || ||||| | | || |||| ||| |||||||| Sbjct 18130 CACCGTGATGGTAGGCGGACTTTTCCGCCACCGAACCTGCCAGCTGGGCCACCTT 18076 >seq1920 Length=889085 Score = 141 bits (156), Expect = 1e-28 Identities = 285/415 (69%), Gaps = 11/415 (3%) Strand=Plus/Plus Query 124487 CTCGATAAACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTCGGGAAT 124546 ||| | |||||| || | |||||| ||||||||| |||| ||||||||||| || Sbjct 343061 CTCCACAAACTCCCGCACCGAGTGCGTTTCACCCGTGGCAATGACGAAATCTTCCGGCCG 343120 Query 124547 CGACTGCTGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCG 124606 |||||||| ||| |||||||| || | ||||| |||| ||||| |||||||| || Sbjct 343121 TTCCTGCTGCATCATCAGCCACATCGCCTCAACGTAATCCTTCGCGTGGCCCCAGTCACG 343180 Query 124607 CTTGGCATCCAGGTTTCCGAGCTC--GAT-TGGCT--TGGCCG-TCTTGTTCCACTCCGC 124660 ||| | || || || || ||||| ||| | || || ||| | || || | Sbjct 343181 CTTTGAGTCGAGATTGCCCAGCTCCAGATATTCCTGCTGACCGAGCGAAATCTTTGCCAC 343240 Query 124661 CAAACCCAGTGTAATCTTGCGCGTCACAAACTCGGAACCGCGTCGCTCAGACTCGTGGTT 124720 | ||| | || || |||||||||||||| | ||||| ||| |||||||| || Sbjct 343241 CGAAC---GGGTGATTTTGCGCGTCACAAAATTCTCCCCGCGGCGCGGTGACTCGTGATT 343297 Query 124721 GAACAGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTCATCCA 124780 |||||| |||||| | || || ||||| |||||| || || ||||| | ||||| Sbjct 343298 GAACAGGATGCCATTGCAGGCGAACATATCGTACGCTTCACGATAGTTGATTACAATCCA 343357 Query 124781 ATACCCAAAGAGCTT-GGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGTGTTTTCAT 124839 ||||| | | ||| | ||| | | || || ||||| ||||| ||||| || || | Sbjct 343358 GTACCCGTACATCTTCGCACAAG-CGTACGGCGAGCGGGGATAGAACGGGGTCTTCTCGT 343416 Query 124840 TTTGGGTAGGTTGCTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGATAGAA 124894 | || | | | | | |||||| ||| ||||| || |||||| ||||| Sbjct 343417 TCTGCGGCGTCTCCACCACCTTCCCGTACAGTTCCGACGTGGACGCCTGGTAGAA 343471 >seq2119 Length=1501809 Score = 82.4 bits (90), Expect = 8e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843 |||| || ||||| || | || |||||||| || ||||||||||||| ||| ||||| Sbjct 1235030 ATCAGCTCGTTCGAGAAGGTGAGTCCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATT 1235089 Query 74844 GCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTT 74901 | | |||| |||||||||||||| ||||| || ||||| || |||| |||| Sbjct 1235090 GAAGCGAAGCTTCCACTGAAGAAGATACCTTCAACGGCGGCAAACGCCACAACCCGTT 1235147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547197716145400