Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2452 170 2e-37 seq1391 149 7e-31 seq147 149 7e-31 seq890 113 5e-20 seq2523 104 3e-17 seq2119 91.5 2e-13 >seq2452 Length=1332465 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || || || ||||| ||||| |||||||| ||| | Sbjct 204092 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTCG 204033 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | |||| ||||||| || || ||||| ||||||||||||||||| || || Sbjct 204032 GATACGATCGAAAATGTGAAGGCGAAGATCCAGGATAAGGAGGGAATTCCTCCGGATCAA 203973 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||| || ||||| || ||||||| ||| || || | || || || Sbjct 203972 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGTCCGATTACAAC 203913 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || |||||| | || | || || |||||||| Sbjct 203912 ATCCAGAAGGAGTCGACCCTTCATTTGGTGCTTCGCCTGCGCGGTGG 203866 >seq1391 Length=279726 Score = 149 bits (164), Expect = 7e-31 Identities = 695/1081 (64%), Gaps = 52/1081 (5%) Strand=Plus/Plus Query 80705 AGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGC 80764 ||| ||||| |||||| | || |||| |||||| || |||||| |||| || | ||||| Sbjct 2402 AGCGCATCAAGATGAACGCATCGGCCATGCCCTGCACACCGATGCCGATGGGTCTGTGGC 2461 Query 80765 GCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCA 80824 || |||| || |||| |||||||| | ||||| ||||| || |||| ||||| Sbjct 2462 GCATGTTGGAGCGCTTAGCCTCCGGCACAGGGTAGTAGTTAACGTCAATGATTTTGTTCA 2521 Query 80825 GGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA---TTGGTTCC 80881 | |||||||| || | | || || | || || ||| ||| | || || | Sbjct 2522 GATTGCGTGTCACTATTTTGGCCACTTCCTTCAGCTTAGCAAAATCGTACGTTTTGTCCT 2581 Query 80882 CCTTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCA--GC 80939 ||| || || || | || || ||||||||||| || | || || | Sbjct 2582 GCTTTACGAACATGTTCAGCGCAATCGAGGCTAGATTGCACACCGCTATTTCGTCCTTGG 2641 Query 80940 ATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTT 80999 | ||| ||| || || || ||||||| || ||| |||| || || || | ||| | Sbjct 2642 ACGAGTA--CTCCACAATCTCGGTGCACAGGTTGGAACACTTGATGGTGCCAATGTTCTG 2699 Query 81000 CTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGAC 81059 ||| || ||| || || || |||||||| ||||||||| ||| || || || Sbjct 2700 CTGATTGCTCTTACGATTACACGCATCCTTGTACAGCATGTACGGTACACCCGTTTCAAC 2759 Query 81060 CTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGC- 81118 ||| |||| || ||| || ||| | || ||||||| ||||| || | || Sbjct 2760 CTGCGACTCGATGATAGCAAACCATAGGTCCTGCGCCTT---CACCTGTCGAATAAAGCG 2816 Query 81119 --CTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACT--TGGCACCGTGAAGTTCAGT 81173 | || | | ||| | ||| |||||| ||||||| | || || ||| || | Sbjct 2817 ACCCTCCTTCTCGTACCCCGTGTACAGCTTC-TCGAACTCTTCGCCCCACGAA--TCGGC 2873 Query 81174 GAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTC---TCTACAGC 81230 | | || || |||| || |||||||| ||| | |||||| || ||| Sbjct 2874 CAATCCGGGACAGTCGTGCGGACACATCAGACTCCACA---TTTCGTTCGCCTCGACACG 2930 Query 81231 CTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTC 81290 ||||||||| || || |||||||||||| |||| ||| ||| ||| |||| || Sbjct 2931 CTTCATGAACAGATCCGGTATCCAGAGGGCGTAAAACATGTCCCGGGCTCGCACCTCTTC 2990 Query 81291 ATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAG 81350 | || ||| | |||||||| || | || || | ||||| ||||| || Sbjct 2991 TTTGCCGGTGTTTTTCTTAAGATCGAGAAACTCGAATATATCTCCGTGCCACGGCTCGAG 3050 Query 81351 ATACACGGCGATCGACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGT 81404 ||| | |||| || | || || || ||||||||||| ||| || || || || Sbjct 3051 ATAGATAGCGAACG-CTCCAGGC--CGTTTGTTGCCACCCTGGTCGACATACCGTGCCGT 3107 Query 81405 CGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGAT 81464 ||| | || |||||||| || | | || | ||| ||||||||||| ||| Sbjct 3108 ATTGTTGTACACGCGCAACATCGGCACCAGTCCGTTTGAAATTCCGTTCGTACC--AGAT 3165 Query 81465 ACG--CGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACT 81520 | | || ||||| ||||| | | ||| || || || || ||||| | | | Sbjct 3166 ATGTACGTTCCCTTCGCGCGGATGCAGTGCACGTT--CAGGCCAATACCACCGGCAGATT 3223 Query 81521 TTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCA 81580 | ||||| | |||||| | || | || || || || |||||||| || || | || Sbjct 3224 TGGAAATAAGGGCACACTGCTTGAGCGTATCGTAGATACCCTCGATACTGTCATCGGACA 3283 Query 81581 TGTCAAGCAAGAAACAGCTTGACATCTGAGG--GCTTTTTGAGCCG--GCATTGAACAGT 81636 || |||| |||||| |||| ||| || ||| || |||| ||| |||| Sbjct 3284 TGGTCAGCAGAAAACAGGAAGACAGCTGGGGCCGCTGCGTG-GCCGCCGCA---AACATG 3339 Query 81637 GTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCG 81695 || || | || || |||| || || | |||| ||| | || ||||| | | || Sbjct 3340 GTCGGTGAAGCATGGGTGAAGTAGCGCTCGGACAGCAGATTGTACGTTTCGATCGCTGCA 3399 Query 81696 TGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755 | | || || || ||||| |||||||| || || ||||| | ||||| ||| ||| ||| Sbjct 3400 TCG-ATGTCTTCGCCGTGGATACCGATGGCGACGCGCATCAGCATGTGCTGTGGCCGCTC 3458 Query 81756 G 81756 | Sbjct 3459 G 3459 >seq147 Length=443619 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || ||||| |||||||| || || || ||||| ||| | Sbjct 111699 ATGCAGATTTTCGTGAAAACTCTTACTGGCAAGACCATCACACTCGAGGTCGAGCCTTCG 111758 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || || ||||||||||| || ||||| ||||| ||| Sbjct 111759 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 111818 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| || ||||||| ||| || || | || || || Sbjct 111819 CAGCGACTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCTGATTACAAC 111878 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || |||||||| || |||| ||||| || || Sbjct 111879 ATCCAGAAGGAATCGACCCTTCATCTGGTGCTGCGACTTCGTGGAGG 111925 >seq890 Length=1089215 Score = 113 bits (124), Expect = 5e-20 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 27502 AAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGAT 27561 |||||||| || || ||||| ||||||||||| || ||||| || ||||| || |||||| Sbjct 230248 AAGGAGGGCATCCCACCAGATCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGAT 230307 Query 27562 GATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621 | ||| || || | |||||||| | || ||||||||||| || ||||| || | ||| Sbjct 230308 GGTCGCACTCTTTCGGACTATAACATTCAGAAGGAATCCACGCTCCATCTGGTTCTCCGT 230367 Query 27622 CTTCGCGGTGGA 27633 || || |||||| Sbjct 230368 CTGCGTGGTGGA 230379 >seq2523 Length=22734 Score = 104 bits (114), Expect = 3e-17 Identities = 278/422 (66%), Gaps = 6/422 (1%) Strand=Plus/Plus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 || || || |||||| || ||||| ||| | | | ||||| ||||| || | Sbjct 18007 GATGGGCTGAAGCCTGGCCAACGCAAAGTGCTGTTCACCTGCTTCAAGCGTGACGACAAG 18066 Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103 | || | |||||||| |||||| | || | ||||| || | | ||||| || ||| Sbjct 18067 CGCGAGGTAAAGGTGGCCCAGCTGGCAGGTTCGGTGGCGGAAAAGTCCGCCTACCATCAC 18126 Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163 || |||| ||||||| ||| || |||||||| || ||||| | || ||| || Sbjct 18127 GGTGAGGTGTCGCTCTGCTCCACGATCGTCAACCTGGCGCAGAATTACGTTGGTAGCAAC 18186 Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223 ||| | || | || | || ||| ||||| || || || || | || |||||||| Sbjct 18187 AACATCAATCTGCTGTATCCGGGTGGTCAGTTCGGTACGCGCCTGACGGGCGGCAAGGAC 18246 Query 32224 GCTGCGAGCTCCCGTTACATCTTCAC---CCGTCTCGCACCTTCGACGCGCAAGATTTTC 32280 || || | | ||||||||||| | | ||| ||| |||||| | || ||| Sbjct 18247 AGCGCCAGTCCTAGGTACATCTTCACAATGCTTTCCGC-CCT--GACGCGACACATCTTC 18303 Query 32281 GACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCG 32340 | ||| ||||||| | || | ||||| | | |||||| || ||| |||| || Sbjct 18304 CATCCGCTGGACGATCCACTGTTAGAGTACCAGGTCGATGACAATCTGCGCATCGAACCT 18363 Query 32341 GTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACG 32400 || | || ||| | | |||||| | |||| |||||||| ||||| ||||| || Sbjct 18364 GTCTGGTATCTGCCGATCATACCGATGGTGCTGGTCAACGGTGCGGAAGGTATCGGTACC 18423 Query 32401 GG 32402 || Sbjct 18424 GG 18425 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 31177 GGGTCCAAAAAGTCTCGAATTACGGGAATTCCGAAGCTCGACGACGCCAACTGGGCCGGT 31236 || ||||||||||| || | ||| || || ||||| || ||||||||| |||||| Sbjct 17131 GGCTCCAAAAAGTCCAAGATCAAGGGTATCCCCAAGCTGGAGGACGCCAACGATGCCGGT 17190 Query 31237 ACCCACAAGTCGCACGAGTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTT 31296 | | ||| |||| | | || ||||| || |||||||||| ||||| || || |||| Sbjct 17191 TCGCGCAATTCGCTCAACTGTACGCTCATCCTTACCGAGGGAGACTCAGCCAAAACGCTC 17250 Query 31297 GCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGC 31356 || | | || || |||| || || || | ||| ||| ||||||||||| || || Sbjct 17251 GCCGTGTCCGGGCTGGGTGTGGTCGGTCGTGACACGTACGGTGTGTTTCCGCTGCGCGGT 17310 Query 31357 AAGCCGCGTAACGTTCGTGACGC 31379 ||| || ||||| || || || Sbjct 17311 AAGTTGCTGAACGTGCGCGAAGC 17333 >seq2119 Length=1501809 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785 || |||||| || ||||| || ||||| ||| ||| ||| || |||||||| Sbjct 1235136 GCGTTTGCCGCCGTTGAAGGTATCTTCTTCAGTGGAAGCTTCGCTTCAATCTTCTGGCTG 1235077 Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845 || ||||| ||||||||||| || || | || |||||||||||||| || || ||||| Sbjct 1235076 AAGAAGCGTGGCCTGATGCCTGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAA 1235017 Query 64846 GGGCTCCACCAAGAATTTGC 64865 ||||| ||| || ||||| Sbjct 1235016 GGGCTACACTGTGACTTTGC 1234997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570291344503760