Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq147 168 2e-36 seq2452 156 1e-32 >seq147 Length=443619 Score = 168 bits (186), Expect = 2e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||||| || || || ||||| || || || || |||||||| ||||| | || Sbjct 111923 TCCACGAAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGAGAG 111864 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||| |||||||||||||| |||||||| || || || || || || |||| Sbjct 111863 AGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGATCTGGGGGAAT 111804 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||||||||||||||||| ||||| || ||||| ||||| || || ||||| Sbjct 111803 GCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTC 111744 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||| ||||| ||||| || || ||||| || || || | |||||| || Sbjct 111743 GAGTGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAAATCTGCATGTT 111696 >seq2452 Length=1332465 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| || ||||| || |||||||| ||||| | || || | ||||| ||||||||| Sbjct 203890 TGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGCGTGCGACCATCCTCCAGCTGC 203949 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || || || || || ||||| || ||||||| ||| ||||| ||||||||||| Sbjct 203950 TTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTATCCTGGATCTTC 204009 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||||| |||||||| || || ||| || ||||| || || || ||||| |||||| Sbjct 204010 GCCTTCACATTTTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCGTG 204069 Query 211092 AGAGTCTTTACAAACACCTGCATTTT 211117 || || || || || | |||||| || Sbjct 204070 AGGGTTTTGACGAAGATCTGCATCTT 204095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159112301579645