Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2119 107 2e-18 >seq2119 Length=1501809 Score = 107 bits (118), Expect = 2e-18 Identities = 280/420 (67%), Gaps = 8/420 (2%) Strand=Plus/Plus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 ||||| || || || ||||| || || ||||| ||| || || ||||| || || | Sbjct 1234820 AGCAAACGATCCGCCACAAACTCGATGTACTGCGACATCAGATCACAGTTCATGCCGAGC 1234879 Query 4434 AATCTCA-CAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | | ||| | || || || | |||| |||||| || || || || || || ||| Sbjct 1234880 A-TGTCAACGGGCAGTGCCTTCGTCAGAAACTCCTGCTCGATCACGACAGCATCGCGGAT 1234938 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 || || | | || || || || || | || | || |||| | ||| || Sbjct 1234939 AATCTCCGTCACGCGCTCCTTCGACGGCTTCTGAACCAGATACTTGAACATCAGACAGGC 1234998 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 ||| ||||| || | |||||||| | |||||| ||||| || || || | ||| || Sbjct 1234999 AAAGTCACAGTGTAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTCCAGG 1235058 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672 ||| | || | ||| || ||||| || || | || || ||| ||||| || || Sbjct 1235059 CATCAGGCCACGCTTCTTCAGCCAGAAGATTGAAGCGAAGCTTCCACTGAAGAAGATACC 1235118 Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT--CTTTA-AT 4729 ||| |||||||||||||| || || | | | | || || |||| || | || | || Sbjct 1235119 TTCAACGGCGGCAAACGCCAC-AACCCGTTCGCCAA--AGTTGGCCTTCTTGCTCGAGAT 1235175 Query 4730 CCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA 4789 ||| || | |||||||| ||| || ||||| |||||||| | || | || |||||||| Sbjct 1235176 CCAGTTCAGTGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGCGTTAAA 1235235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427035687925109