Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2452 170 4e-37 seq147 165 2e-35 seq890 105 1e-17 seq2523 95.1 3e-14 seq1920 93.3 9e-14 seq2219 86.0 1e-11 seq2131 86.0 1e-11 seq1944 86.0 1e-11 seq1897 86.0 1e-11 seq1435 86.0 1e-11 seq1347 86.0 1e-11 seq1001 86.0 1e-11 seq347 86.0 1e-11 seq335 86.0 1e-11 >seq2452 Length=1332465 Score = 170 bits (188), Expect = 4e-37 Identities = 178/234 (76%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 282869 TGAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC 282928 || |||||| ||||||||||| |||| ||| | || || || ||||||||||| || Sbjct 203862 TGCACCACCGCGCAGGCGAAGCACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATC 203921 Query 282929 AGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACC 282988 | |||||||| |||||||| || || || |||||||| |||| ||| ||||| || Sbjct 203922 GGACAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGG 203981 Query 282989 CGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTC 283048 ||||| |||||||| || |||||||| || || || | ||||| || ||||| | || Sbjct 203982 AGGAATTCCCTCCTTATCCTGGATCTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTC 204041 Query 283049 GACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| || || || || ||||||||||| | || || ||||| |||||||| || Sbjct 204042 GACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 204095 >seq147 Length=443619 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || |||||||| | || ||| || ||||||||||| |||| Sbjct 111926 ACCTCCACGAAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGA 111867 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| |||||||| || || || ||||| ||||| | || || || || || Sbjct 111866 GAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGATCTGGGGG 111807 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| || || || | ||||| |||||||||| ||||| Sbjct 111806 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGAC 111747 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| ||||| || || | ||| || ||||| |||||||| || Sbjct 111746 CTCGAGTGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAAATCTGCATGTT 111696 >seq890 Length=1089215 Score = 105 bits (116), Expect = 1e-17 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || |||||||| | |||| ||| || || ||||| ||||| | | Sbjct 230378 CCACCACGCAGACGGAGAACCAGATGGAGCGTGGATTCCTTCTGAATGTTATAGTCCGAA 230319 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| || || || ||||||||||||| ||| || || || || Sbjct 230318 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGTGGG 230259 Query 282993 ATACCCTCCTT 283003 || |||||||| Sbjct 230258 ATGCCCTCCTT 230248 Score = 96.9 bits (106), Expect = 7e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 || || ||||||||||| || ||||| || || ||| | || || || ||||| | |||| Sbjct 223801 GGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTCTCAATCGTATCCGATGGTTCG 223742 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || || ||||| ||||| || |||| ||| || ||||| ||||||||||| Sbjct 223741 ACCTCCAGCGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCATTTT 223689 >seq2523 Length=22734 Score = 95.1 bits (104), Expect = 3e-14 Identities = 293/452 (65%), Gaps = 6/452 (1%) Strand=Plus/Minus Query 273597 GGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATACCGGAAGAACCATTCACC 273656 || |||| | |||| | ||||| ||||||||||| || ||||| | ||| || ||| Sbjct 18455 GGATTGTGATTCGGGATTTTCGTTGACCAACCGGTACCGATACCTTCCGCACCGTTGACC 18396 Query 273657 AGAATACTCGGGATAATTGGGACATAATATTCGGGCTCAATTTT---ATCACCATCGTCG 273713 || | |||| || || || | ||| | | || || || || ||||| | Sbjct 18395 AGCACCATCGGTATGATCGGCAGATACCAGACAGGTTCGATGCGCAGATTGTCATCGACC 18336 Query 273714 TAAAGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCTTTCGCGTCTGAGGATTC 273773 | |||||| |||| | ||| ||| | ||| | | ||||||| | | Sbjct 18335 T---GGTACTCTAACAGTGGATCGTCCAGCGGATGGAAGATGTGTCGCGTCAGGGCGGAA 18279 Query 273774 AGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCA 273833 || | ||||| |||||||| | ||| || ||||||||| || ||| | || ||| Sbjct 18278 AGCATTGTGAAGATGTACCTAGGACTGGCGCTGTCCTTGCCGCCCGTCAGGCGCGTACCG 18219 Query 273834 AACTGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATA 273893 |||||||| | || ||| || |||||||||||||| ||||||| ||| |||| Sbjct 18218 AACTGACCACCCGGATACAGCAGATTGATGTTGTTGCTACCAACGTAATTCTGCGCCAGG 18159 Query 273894 TTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATA 273953 || ||||| || || || ||||| ||||| || |||||| | ||| || | Sbjct 18158 TTGACGATCGTGGAGCAGAGCGACACCTCACCGTGATGGTAGGCGGACTTTTCCGCCACC 18099 Query 273954 TAACCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAATGCGGAATAC 274013 |||| | ||| || ||||| || |||| | | || |||||||| || || Sbjct 18098 GAACCTGCCAGCTGGGCCACCTTTACCTCGCGCTTGTCGTCACGCTTGAAGCAGGTGAAC 18039 Query 274014 AACACCTTCCGCTGCGAGGGCTTGAACCCATC 274045 | ||| || || || ||||| | |||||| Sbjct 18038 AGCACTTTGCGTTGGCCAGGCTTCAGCCCATC 18007 >seq1920 Length=889085 Score = 93.3 bits (102), Expect = 9e-14 Identities = 250/377 (66%), Gaps = 4/377 (1%) Strand=Plus/Minus Query 43983 CCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGAC 44042 ||| ||||| || ||||| ||||||| ||||| ||||| || || | || | ||| Sbjct 343466 CCAGGCGTCCACGTCGGAACTGTACGGGAAGGTGGTGGAGACGCCGCAGAACGAGAAGAC 343407 Query 44043 TCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTTGTAA 44102 ||||| |||||||| || || | | |||||| | || | || |||||| |||| Sbjct 343406 CCCGTTCTATCCCCGCTCGCCGTACGCTTGTGCGAAGATGTACGGGTACTGGATT-GTAA 343348 Query 44103 A-AATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAAA 44161 || ||||| || |||| | ||||||| || ||| || ||||||||||| Sbjct 343347 TCAACTATCGTGAAGCGTACGATATGTTCGCCTGCAATGGCATCCTGTTCAATCACGAGT 343288 Query 44162 GTCCCAACAGAGGTCATCAGTTCGTGACTCGTAAAATCACGAAAGCGGTTGCGAATATTT 44221 || | | || | | || ||||| || |||||||| |||| || || | || Sbjct 343287 CACCGCGCCGCGGGGAGAATTTTGTGACGCGCAAAATCACCCGTTCGGTGGCAAAGA-TT 343229 Query 44222 TCAACGGGACAG-AAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGA 44280 || || ||| | ||| || | || || || | ||||| || | || ||||| Sbjct 343228 TCGCTCGGTCAGCAGGAATATCTGGAGCTGGGCAATCTCGACTCAAAGCGTGACTGGGGC 343169 Query 44281 TATGCCTTGGATTATGTAGAAGCCATGTGGCTGATGTTGCAACAAGACAGGTCAGACGAC 44340 | || |||||| || || || |||||||||||| |||| || || || | || || Sbjct 343168 CACGCGAAGGATTACGTTGAGGCGATGTGGCTGATGATGCAGCAGGAACGGCCGGAAGAT 343109 Query 44341 TACGTTATTGCAACTGG 44357 | ||| ||||| || || Sbjct 343108 TTCGTCATTGCCACGGG 343092 >seq2219 Length=695684 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 327905 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 327961 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 541934 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 541878 >seq2131 Length=706443 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 487382 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 487326 >seq1944 Length=188785 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 73487 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 73543 >seq1897 Length=2554132 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 1607139 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1607195 >seq1435 Length=268643 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 68873 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 68929 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 70102 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 70158 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 71362 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 71418 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 72177 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 72233 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 73962 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 74018 >seq1347 Length=266621 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 215568 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 215512 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 216188 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 216132 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 216333 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 216389 >seq1001 Length=1072909 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 710551 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 710607 >seq347 Length=396583 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 229042 TAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 229098 >seq335 Length=1191755 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 338368 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 338312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046703351472142