Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2452 145 5e-30 seq147 125 5e-24 seq890 82.4 5e-11 >seq2452 Length=1332465 Score = 145 bits (160), Expect = 5e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||||| || |||||| |||||||||||||||| || ||| | || || Sbjct 203883 CACCAAATGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGACAGCGTGCGACCATCCTC 203942 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| |||||||| |||| |||||| ||||| | ||| | || ||||| ||| Sbjct 203943 CAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTATCCTG 204002 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| || | || || || | || || ||||| | ||||| ||||| Sbjct 204003 GATCTTCGCCTTCACATTTTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTT 204062 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| || |||||||| ||||| Sbjct 204063 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 204092 >seq147 Length=443619 Score = 125 bits (138), Expect = 5e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||| || |||||| ||||| || ||||| |||||||||||||| | ||| ||| Sbjct 111916 AGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGA 111857 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| ||||| ||||| | ||||||||||||| || | |||||| Sbjct 111856 CCATCCTCCAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGATCTGGGGGAATGCCTTCC 111797 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||||| | | || ||||| | | || ||||| | || Sbjct 111796 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCGAGTGTG 111737 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||| || || || || |||||||| || |||||| Sbjct 111736 ATGGTCTTGCCAGTAAGAGTTTTCACGAAAATCTGCATG 111698 >seq890 Length=1089215 Score = 82.4 bits (90), Expect = 5e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| || |||||| ||||| || ||||| || || | || ||| | || ||| Sbjct 230360 ACCAGATGGAGCGTGGATTCCTTCTGAATGTTATAGTCCGAAAGAGTGCGACCATCCTCC 230301 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTT 44241 |||||||| ||||||||||||| |||||||||||||| || | || ||||| Sbjct 230300 AGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATGCCCTCCTT 230248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359978672525241