Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20epiroticus_20[genbank_20GCA_5F000349105.1_202013-03-28] 2,673 sequences; 223,486,714 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq147 163 7e-35 seq890 96.9 8e-15 >seq147 Length=443619 Score = 163 bits (180), Expect = 7e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||||||||| || || || || ||||| |||||||| || || ||| Sbjct 111702 CAGATTTTCGTGAAAACTCTTACTGGCAAGACCATCACACTCGAGGTCGAGCCTTCGGAC 111761 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| || || ||||| |||||||| ||||| || || || || ||||| Sbjct 111762 ACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAGCAG 111821 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| || ||||| || ||||| | ||||| | ||||| ||| || Sbjct 111822 CGACTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCTGATTACAACATC 111881 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || ||||| || || ||||| || || |||| Sbjct 111882 CAGAAGGAATCGACCCTTCATCTGGTGCTGCGACT 111916 >seq890 Length=1089215 Score = 96.9 bits (106), Expect = 8e-15 Identities = 93/119 (78%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | ||||||||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 223689 AAAATGC---AGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACGCTGGAGGTCGAA 223745 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCC 178033 || || || || ||||||||||| |||||||||||||| || || ||||| || Sbjct 223746 CCATCGGATACGATTGAGAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCACC 223804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203689974839562