Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq19 100 6e-16
seq3 93.3 9e-14
seq18 91.5 3e-13
seq15 91.5 3e-13
seq5 91.5 3e-13
seq4 91.5 3e-13
seq2 91.5 3e-13
seq7 89.7 1e-12
seq1 89.7 1e-12
>seq19
Length=1744624
Score = 100 bits (110), Expect = 6e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 281740 TCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACT 281799
|||||||||| ||||| | || ||| || ||||| ||| || || || |||||||
Sbjct 912344 TCGTGAAGATGTACCTCGGGCTGGCGCTATCCTTACCGCCCGTCAACCGCGTACCAAACT 912285
Query 281800 GACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGA 281859
|||| |||| ||| | ||| ||||| ||||| |||||||| | ||| ||||||||||
Sbjct 912284 GACCGCCCGGGTACAGCAGGTTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGA 912225
Query 281860 CGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAAC 281919
||| ||| ||||| ||| ||||| || || ||| ||| || || |||
Sbjct 912224 TGATCGTCGAACAGAGCGACTGCTCGCCGTGATGGTACGCGGACATTTCCGCCACCGAAC 912165
Query 281920 CACTGAACTGTGCTACCTTCACGTC 281944
| ||||| || |||||||| ||
Sbjct 912164 CTGCCAACTGGGCCACCTTCACCTC 912140
>seq3
Length=16089237
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 165706 GCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTC 165765
|| |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||
Sbjct 15381546 GCATGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 15381605
Query 165766 GAGCCCCACGATGGGC 165781
|||||||||| |||||
Sbjct 15381606 GAGCCCCACGTTGGGC 15381621
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 4061336 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4061277
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 4061276 CCCCACGTTGGGC 4061264
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 4530109 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4530050
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 4530049 CCCACGTTGGGC 4530038
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 4532021 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4532080
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 4532081 CCCACGTTGGGC 4532092
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 4544768 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4544709
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 4544708 CCCACGTTGGGC 4544697
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 4569127 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4569186
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 4569187 CCCACGTTGGGC 4569198
>seq18
Length=1856345
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 1571803 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1571862
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 1571863 CCCCACGTTGGGC 1571875
>seq15
Length=2584459
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 1141555 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1141496
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 1141495 CCCCACGTTGGGC 1141483
>seq5
Length=12895223
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 2280537 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2280478
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 2280477 CCCCACGTTGGGC 2280465
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 3597563 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3597622
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 3597623 CCCACGTTGGGC 3597634
Score = 86.0 bits (94), Expect = 1e-11
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 3647837 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3647778
Query 165770 CCCACGATGG 165779
|||||| |||
Sbjct 3647777 CCCACGTTGG 3647768
>seq4
Length=15719670
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 5323441 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5323500
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 5323501 CCCCACGTTGGGC 5323513
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 5319406 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5319347
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 5319346 CCCACGTTGGGC 5319335
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 8053241 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 8053300
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 8053301 CCCACGTTGGGC 8053312
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 11777699 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 11777758
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 11777759 CCCACGTTGGGC 11777770
>seq2
Length=22738934
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 8126621 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 8126562
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 8126561 CCCCACGTTGGGC 8126549
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 17548636 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 17548577
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 17548576 CCCCACGTTGGGC 17548564
Score = 87.8 bits (96), Expect = 4e-12
Identities = 246/375 (66%), Gaps = 2/375 (1%)
Strand=Plus/Minus
Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGACT 61148
||||| || || || ||||| ||||| || || |||| || || | |||| |||
Sbjct 20260898 CAAGCGTCCACGTCCGAACTCTATGGCAAGGTGGTCGAAACGCCGCAGAACGAAAAAACT 20260839
Query 61149 CCGTTTTATCCTCGTAGCCCGTATG-GTGTTGCAAAACTATACGCTTACTGGATTTGTAA 61207
|| || ||||| || ||||| | |||| || ||| | |||| |||||||| |
Sbjct 20260838 CCATTCTATCCGCGATCGCCGTACGCGTGT-GCGAAAATGTACGGCTACTGGATAGTGAT 20260780
Query 61208 AAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATCACGAGAG 61267
||||| |||||| |||| ||||||| || ||| ||| || || ||||||
Sbjct 20260779 CAATTATCGCGAGGCGTACAACATGTTTGCTTGCAACGGTATTCTCTTTAACCACGAGTC 20260720
Query 61268 TCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAAATATTTT 61327
||| ||||| | | |||||||| |||||||| || |||| || || ||||
Sbjct 20260719 GCCCCGGCGAGGTGAGAACTTTGTGACGCGTAAAATCACTCGCTCGGTGGCGAAGATTTC 20260660
Query 61328 TAACGGTGTCGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGATA 61387
||| | | ||| | | || || || | || || || | || ||||| |
Sbjct 20260659 GCTCGGCCAGCAGGAGTGCGTCGAGCTCGGTAATCTCGATTCGAAGCGTGACTGGGGCCA 20260600
Query 61388 TGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGATACTCCAGATGACTA 61447
|| |||| || |||| || |||||||||||| |||| || | || || || |
Sbjct 20260599 CGCAAAAGACTACGTCGAAGCAATGTGGTTGATGATGCAGCAGAAGCAGCCGGAAGATTT 20260540
Query 61448 CGTTATTGCGACTGG 61462
||| |||||||| ||
Sbjct 20260539 CGTCATTGCGACGGG 20260525
>seq7
Length=7675037
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 5458043 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5458102
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 5458103 CCCACGTTGGGC 5458114
>seq1
Length=30017264
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 17030206 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 17030147
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 17030146 CCCACGTTGGGC 17030135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057819798455300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |