Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq2 196 5e-45
>seq2
Length=22738934
Score = 196 bits (216), Expect = 5e-45
Identities = 402/595 (68%), Gaps = 2/595 (0%)
Strand=Plus/Plus
Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA-TAAGACGTA 16856
|||||| || || || || || || |||| | |||||||||||| || | | | || |
Sbjct 19671868 ATCCGCCACGAACTCAATGTACTGCGACATCAGTTCGCAGTTCATGCCGAGCATGTCG-A 19671926
Query 16857 CCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAG 16916
|||| || || | ||||| || ||||| || || ||||| || || || |
Sbjct 19671927 CCGGCAGTGCCTTCGTCAGGAACTCCTGCTCGATCACGACCGCATCGCGGATGATCTCCG 19671986
Query 16917 CAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGC 16976
|| || |||| |||||| | || |||| |||||||| || || || || |
Sbjct 19671987 TCACGCGCTCCTTCGACGGTTTCTGCACCAGATACCGGAACATCAGGCAGGCAAAGTCAC 19672046
Query 16977 AATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTC 17036
| || | ||||||||| | ||| || ||||| || || |||| ||| ||||| |
Sbjct 19672047 AGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTCGAGAACGTCAGCCCCGGCATTAGGC 19672106
Query 17037 CTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGG 17096
| || ||||| | ||| || || || || || ||| |||||| || |||||||| |
Sbjct 19672107 CGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTAAAGAAGATGCCCTCGACTG 19672166
Query 17097 ATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCA 17156
|| ||||| | | || || | | | || | ||| | ||||| ||| ||
Sbjct 19672167 CAGCGAACGCAACCACACGCTCCCCAAAGTTGGCCTTCTTGCTGGAGATCCAGTTCAGCG 19672226
Query 17157 CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTT 17216
|||| ||||| || | ||||| ||| || |||||| || || || || | | |||
Sbjct 19672227 CCCAGTCGGCCTTCTTCTTTACGCACGGCAGCGTTTCGATCGCGTTGAACAGATACTCCC 19672286
Query 17217 TTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGT 17276
|||| ||||| ||| ||||| ||||| || || |||||||||| ||| | ||
Sbjct 19672287 GCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATTTCGCTGTGCACGT 19672346
Query 17277 TCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGT 17336
||||||| || |||||||| ||||| ||||| ||||| |||| | || || ||| |
Sbjct 19672347 TCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCACCTGCACCTCCTGGC 19672406
Query 17337 AGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391
||| || ||| | ||||| || || ||||| ||||| |||||||| || ||
Sbjct 19672407 TGAAGCGCTCCACCAGATTCTCATTTACGATACCGTCCGAGGCGGCGAAGAAGGC 19672461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517543594510800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |