Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq12 132 4e-26 >seq12 Length=3202847 Score = 132 bits (146), Expect = 4e-26 Identities = 237/343 (69%), Gaps = 10/343 (3%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGT---- 20273 || |||||||| |||||||| || ||||||||| |||| |||||||| |||| Sbjct 246943 GGTGATTTGGGGCCTGTGTACGGGTTTCAATGGCGACACTTTGGAGCAAAATACAAAACG 246884 Query 20274 TGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTT 20333 || ||||| | ||| ||| ||||| | || ||| | | | || || | Sbjct 246883 TGCCATGACGA----TTACACTGGGCAAGGCATGGACCAACTTGCAGAGGTAATCGACAA 246828 Query 20334 AATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGT 20393 ||||||| ||||| |||| | |||| || | |||||||||| | ||| | Sbjct 246827 GATTAAAAACAACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGTCCGATAT 246768 Query 20394 GCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATG 20452 ||| |||||| | || || || ||| |||| || ||||||| |||| ||| | Sbjct 246767 CCCTAATATGGCTCTTCCACCTTGCCAT-TGCTTGGCTCAATTTTTTGTTGATAACGGAG 246709 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 |||| || || || |||||||||||||| || ||| |||| ||||||| || ||||| | Sbjct 246708 AATTATCATGCCAGATGTATCAACGATCGGCCGATGTGGGCTTGGGTGTACCATTCAACA 246649 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 | ||||| || || ||||||| ||||||| || || || || Sbjct 246648 TCGCAAGCTACTCGTTGCTTACCCATATGATCGCGCACGTCAC 246606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399182491832950