Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq12 120 6e-22
seq2 86.0 1e-11
>seq12
Length=3202847
Score = 120 bits (132), Expect = 6e-22
Identities = 226/330 (68%), Gaps = 2/330 (1%)
Strand=Plus/Minus
Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455
|| |||||||| || || ||||| || |||||||| || ||||| || |||| | ||
Sbjct 246943 GGTGATTTGGGGCCTGTGTACGGGTTTCAATGGCGACACTTTGGAGCAAAATACAAAACG 246884
Query 35456 TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTG 35515
|| | |||||| ||||| | || || || ||| | || | || | | | |
Sbjct 246883 TGCCATGACGATTACACTGGGCAAGGCATGGACCAACTTGCAGAGGTAATCGACAAGATT 246824
Query 35516 AGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCAC 35575
| | | || || | ||| | | || || |||| || |||||||| ||| | |
Sbjct 246823 AAAAACAACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGTCCGATATCCCT 246764
Query 35576 CTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATGTGGCTAATGGAGAATT 35634
|||||||||||| || ||||| || | |||||||||| ||| | ||| ||||||||
Sbjct 246763 AATATGGCTCTTCCACCTTGCCA-TTGCTTGGCTCAATTTTTTGTTGATAACGGAGAATT 246705
Query 35635 GTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694
|| |||||| ||||||| ||| | ||||| || ||||| || || ||||| || ||
Sbjct 246704 ATCATGCCAGATGTATCAACGATCGGCCGATGTGGGCTTGGGTGTACCATTCAACATCGC 246645
Query 35695 ATCATACTCTCTTCTGACTCATCTGATGGC 35724
| ||||| | || || ||| |||| ||
Sbjct 246644 AAGCTACTCGTTGCTTACCCATATGATCGC 246615
>seq2
Length=22738934
Score = 86.0 bits (94), Expect = 1e-11
Identities = 152/221 (69%), Gaps = 3/221 (1%)
Strand=Plus/Minus
Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACG---ATTTGGCGGAA 101911
|||||||||| | ||||| | || ||||| ||||| || | | || | |||
Sbjct 19672245 AAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCCAGCAAGAAGGCCAACTTTGGGGAG 19672186
Query 101912 CTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATT 101971
| | ||||| || |||||||| || || |||||||||||||| || || ||||
Sbjct 19672185 CGTGTGGTTGCGTTCGCTGCAGTCGAGGGCATCTTCTTTAGTGGCAGCTTTGCGGCCATC 19672126
Query 101972 TTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCT 102031
|||||| | ||||| | || | |||| || || || | ||| || ||| | || ||
Sbjct 19672125 TTCTGGCTGAAGAAGCGCGGCCTAATGCCGGGGCTGACGTTCTCGAACGAGCTGATCTCG 19672066
Query 102032 AGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
| ||||| || || || | |||||||| ||| || ||||
Sbjct 19672065 CGCGACGAGGGACTGCACTGTGACTTTGCCTGCCTGATGTT 19672025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989580069496050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |