Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 9e-15 >seq2 Length=22738934 Score = 95.1 bits (104), Expect = 9e-15 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || || || || || || ||| || | ||| ||| ||||||||||| ||||||||| Sbjct 19672176 GCGTTCGCTGCAGTCGAGGGCATCTTCTTTAGTGGCAGCTTTGCGGCCATCTTCTGGCTG 19672117 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| || || ||||| ||| || |||| || |||||| |||| || ||||| Sbjct 19672116 AAGAAGCGCGGCCTAATGCCGGGGCTGACGTTCTCGAACGAGCTGATCTCGCGCGACGAG 19672057 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGT 22924 || || |||||||||||||| || || |||| || | ||| | ||||||| Sbjct 19672056 GGACTGCACTGTGACTTTGCCTGCCTGATGTTCCGGTATCTGGTGCAGAAACCGT 19672002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232254104930