Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq12 93.3 5e-14
>seq12
Length=3202847
Score = 93.3 bits (102), Expect = 5e-14
Identities = 210/305 (69%), Gaps = 22/305 (7%)
Strand=Plus/Plus
Query 6937 TTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACAT-TGACAAGATAAAAT 6995
|| || |||||||| || |||| ||| || |||| |||||| ||| || || |||||
Sbjct 246651 TTGAATGGTACACCCAAGCCCACATCGGCCGATCGTTGATA-CATCTGGCATGATAA--- 246706
Query 6996 ATTGTC---TAT-AGCATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGAT 7051
|| || ||| | || |||||||| ||| ||| || || || || |||| ||
Sbjct 246707 -TTCTCCGTTATCAACAAAAAATTGAGCCAAGCAATGGCAAGGTGG---AAGAGCCATAT 246762
Query 7052 CT---ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTT 7108
||||| || |||||||| || |||| | || || | ||| | || || ||||
Sbjct 246763 TAGGGATATCGGACGGATTCCAGGCGCTCATGATGATTCGACGATCGTACGGGTT-GTTT 246821
Query 7109 TTAATTTTGTTATAATTA--TTTGTAA-TTGATCTATACCCTGACCTTCATAATTAGTAT 7165
||||| |||| |||| | || || ||| || || || || || |||| ||
Sbjct 246822 TTAATCTTGTCG--ATTACCTCTGCAAGTTGGTCCATGCCTTGCCCAGTGTAATCGTCAT 246879
Query 7166 GACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAAT 7225
| || || | || || |||||||| |||| |||||||||||| || | ||| || ||||
Sbjct 246880 GGCACGTTTTGTATTTTGCTCCAAAGTGTCGCCATTGAAACCCGTACACAGGCCCCAAAT 246939
Query 7226 CACCT 7230
|||||
Sbjct 246940 CACCT 246944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595869690996000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |