Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq12 93.3 5e-14 >seq12 Length=3202847 Score = 93.3 bits (102), Expect = 5e-14 Identities = 210/305 (69%), Gaps = 22/305 (7%) Strand=Plus/Plus Query 6937 TTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACAT-TGACAAGATAAAAT 6995 || || |||||||| || |||| ||| || |||| |||||| ||| || || ||||| Sbjct 246651 TTGAATGGTACACCCAAGCCCACATCGGCCGATCGTTGATA-CATCTGGCATGATAA--- 246706 Query 6996 ATTGTC---TAT-AGCATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGAT 7051 || || ||| | || |||||||| ||| ||| || || || || |||| || Sbjct 246707 -TTCTCCGTTATCAACAAAAAATTGAGCCAAGCAATGGCAAGGTGG---AAGAGCCATAT 246762 Query 7052 CT---ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTT 7108 ||||| || |||||||| || |||| | || || | ||| | || || |||| Sbjct 246763 TAGGGATATCGGACGGATTCCAGGCGCTCATGATGATTCGACGATCGTACGGGTT-GTTT 246821 Query 7109 TTAATTTTGTTATAATTA--TTTGTAA-TTGATCTATACCCTGACCTTCATAATTAGTAT 7165 ||||| |||| |||| | || || ||| || || || || || |||| || Sbjct 246822 TTAATCTTGTCG--ATTACCTCTGCAAGTTGGTCCATGCCTTGCCCAGTGTAATCGTCAT 246879 Query 7166 GACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAAT 7225 | || || | || || |||||||| |||| |||||||||||| || | ||| || |||| Sbjct 246880 GGCACGTTTTGTATTTTGCTCCAAAGTGTCGCCATTGAAACCCGTACACAGGCCCCAAAT 246939 Query 7226 CACCT 7230 ||||| Sbjct 246940 CACCT 246944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595869690996000