Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq14 100 3e-16 >seq14 Length=2944040 Score = 100 bits (110), Expect = 3e-16 Identities = 356/545 (65%), Gaps = 20/545 (4%) Strand=Plus/Minus Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173 || ||||| || |||| ||| | || || || || | ||||||||||||||| || || Sbjct 113857 ACCGTGAACTGGATCGCATTTACGGCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTC 113798 Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTATAG--GTTGGATT-G 147230 |||||| | | ||| | || ||| || || | || |||| | ||||| || | Sbjct 113797 AAACCCATCTTCCACGCGTAAAAGTGGATCGAGGTTAG---TTTACCGTAGTTGGGTTCG 113741 Query 147231 GCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATG 147290 ||||| | |||| ||||||| ||| |||||| | | ||| || || || ||||| Sbjct 113740 GCCACGTGTATGTTGAACGATTGGGACTGGTCGATGAACGCTCCACGATCGGCCGCCATT 113681 Query 147291 TCCAA-CACTACTTTTTGTTTA-ATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGT 147348 | | ||| |||| | || |||||| | || ||| | || | | | | Sbjct 113680 TGGATGCACG--TTTTAACCGATATCTCCCAAACCGTTTTGTACAGATCGCGCACGTCCT 113623 Query 147349 GTGGAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAATT---TTTATCATGA 147405 ||| |||| || || || || | |||||||||| | | ||| ||| |||| Sbjct 113622 TTGGTATTTTCTCTATTTTCTGGATCGATCCGTTGTGTGCCAGAATGGTGTTTTTCATTT 113563 Query 147406 TATCTGTCGAATATACGTTG-GTG-TCTACGAGTTTATCGACGAGATGCTGATTGACCAC 147463 ||| ||| | | || || ||| || || | | || ||||| || || || || Sbjct 113562 CATC-GTCCCACAGACCGTGCGTGGTC----AGGTCCTTGATCAGATGATGGTTTACAAC 113508 Query 147464 TTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGA 147523 ||| |||||||||| || |||| ||| ||| | || || |||| |||||||| Sbjct 113507 CTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGACGTGTACGGTTCGAACGA 113448 Query 147524 CTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGA 147583 ||| ||||| || || || || ||||||| || || ||||| || | || | ||| Sbjct 113447 CTCATTGTTGCCCAGTATTTGAGCAGTCGAAGCTGTTGGCATCGGTGCTAGCAGCAGTGA 113388 Query 147584 ATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATCATT 147643 || || | ||||||| | || || | | ||| | | | |||| ||||| ||||| | Sbjct 113387 GTTACGAATGCCGTGCTTTGCAATCTTTTCCTTCAACGCCACCCAATTCCACAGATCCGT 113328 Query 147644 CGATT 147648 || || Sbjct 113327 CGGTT 113323 Score = 96.9 bits (106), Expect = 3e-15 Identities = 358/548 (65%), Gaps = 26/548 (5%) Strand=Plus/Minus Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173 || ||||| || |||| ||| | || || || || | ||||||||||||||| || || Sbjct 128568 ACCGTGAACTGGATCGCATTTACGGCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTC 128509 Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAA--TGGAT-GATAAAACTTTATAG--GTTGGAT 147228 |||||| | | ||| | |||||| ||||| || | |||| | ||||| | Sbjct 128508 AAACCCATCTTCCACG------CGTGAAAGTGGATCGAGGTTAGTTTACCGTAGTTGGGT 128455 Query 147229 T-GGCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCC 147287 | |||||| | |||| ||||||| ||| |||||| | | ||| || || || ||| Sbjct 128454 TCGGCCACGTGTATGTTGAACGATTGGGACTGGTCGATGAACGCTCCACGATCGGCCGCC 128395 Query 147288 ATGTCCAA-CACTACTTTTTGTTTA-ATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATAT 147345 || | | ||| |||| | || |||||| | || ||| | || | | | Sbjct 128394 ATTTGGATGCACG--TTTTAACCGATATCTCCCAAACCGTTTTGTACAGATCGCGCACGT 128337 Query 147346 TGTGTGGAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAATT---TTTATCA 147402 | ||| |||| || || || || | |||||||||| | | ||| ||| ||| Sbjct 128336 CCTTTGGTATTTTCTCTATTTTCTGGATCGATCCGTTGTGTGCCAGAATGGTGTTTTTCA 128277 Query 147403 TGATATCTGTCGAATATACGTTG-GTG-TCTACGAGTTTATCGACGAGATGCTGATTGAC 147460 | ||| ||| | | || || ||| || || | | || ||||| || || || Sbjct 128276 TTTCATC-GTCCCACAGACCGTGCGTGGTC----AGGTCCTTGATCAGATGATGGTTTAC 128222 Query 147461 CACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAA 147520 || ||| |||||||||| || |||| ||| ||| | || || |||| ||||| Sbjct 128221 AACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGACGTGTACGGTTCGAA 128162 Query 147521 CGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAA 147580 |||||| ||||| || || || || ||||||| || || ||||| || | || | Sbjct 128161 CGACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGCTGTTGGCATCGGTGCTAGCAGCAG 128102 Query 147581 TGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATC 147640 ||| || || | ||||||| | || || | | ||| | | | |||| ||||| ||||| Sbjct 128101 TGAGTTACGAATGCCGTGCTTTGCAATCTTTTCCTTCAACGCCACCCAATTCCACAGATC 128042 Query 147641 ATTCGATT 147648 ||| || Sbjct 128041 CGTCGGTT 128034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660545183200