Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq14 268 2e-66 seq12 100 7e-16 >seq14 Length=2944040 Score = 268 bits (296), Expect = 2e-66 Identities = 701/1055 (66%), Gaps = 21/1055 (2%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| || | ||||| || | ||||| |||||||| |||||||| |||||||| ||| Sbjct 112077 ATCAAGGGAAAGATTGTCGAGAGACCGCAACATATGTTGATGCGTGTCGCTATTGGCATC 112136 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 || || ||| |||| || ||||| || || || || || || | ||| || Sbjct 112137 CACGGCGAGGACATTGAGGCAGCGATCGAGACGTACAATCTGCTTTCGGAGCGTTACTTT 112196 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 || ||||| | || || |||| || | || | ||| ||| | ||||||||| Sbjct 112197 ACCCACGCTTCTCCGACCATGTTTGCGGCGGCCACACAGCGTCCTCAGCTTTCTTCTTGC 112256 Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 ||||| || | ||| ||||||| |||||| ||||||| || || || ||| | || Sbjct 112257 TTTCTGCTGACCATGTCGGACGATAGCATCGAAGGTATCTACGATACTCTAAAGCAATGC 112316 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGCAC 363727 || | || || || || || || || || || || | ||| | ||||| Sbjct 112317 GCATTGATCTCGAAATCGGCCGGTGGTATCGGACTGAATG--TGCACTGCATCCGTGCGA 112374 Query 363728 AGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786 || | ||||| |||||| | || || ||||| |||||||| || ||||| ||| Sbjct 112375 AGGGAACGTACATCTCCGGCACGAACGGTATT-TCGAACGGGCTGGTACCGATGCTACGT 112433 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 |||| |||| || || |||||||| || ||||| || |||||| ||| |||||| Sbjct 112434 GTGTACAACAACACGGCAAGGTACGTTGATCAGGGCGGTAATAAGCGCCCAGGCGCGTTT 112493 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 ||||| || ||||| || |||| ||| | ||||||||||| || || ||||||| Sbjct 112494 GCTATCTACCTCGAACCGTGGCATGGTGATGTGTTTGAGTTTCTGGATCTGAAGAAAAAC 112553 Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966 || || || ||||| | ||||| || ||| ||||||| || || ||| | | || | Sbjct 112554 ACCGGCAAGGAGGAGGTTCGTGCTCGGGATATGTTCTACGCTCTGTGGATACCGGATCTG 112613 Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCA 364026 || |||||||| |||||||| | | | ||| | | ||||| ||||| ||||| Sbjct 112614 TTCATGAAGCGTGTGGAGGCGAATGAAACGTGGAGTTTGATGTGCCCCCACGATTGTCCC 112673 Query 364027 GGTCTTTCCGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCGG 364084 || || ||||| |||||| || || | | ||| || ||| | || || | Sbjct 112674 GGGCTGGCCGATTCATGGGGCGAAGAGTTCGAGAAGCTGTACACGGGA--TACGAGAAAG 112731 Query 364085 AGGGAAAGGCTCGTAAGACAA-TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCG 364143 |||| | | || | ||| | || || | || |||||||| ||||| || || Sbjct 112732 AGGG-TCGCTTTATACGTCAAGTGAAGGCGCAAGATCTGTGGTTTGCGATCATCGAGTCA 112790 Query 364144 CAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAAC 364203 ||| | || || || ||| || ||| ||||||| ||| ||||||| ||||| |||| Sbjct 112791 CAGGTGGAAACGGGCGTACCGTACATGCTGTACAAGGATGCGTGCAATCGCAAAAGCAAC 112850 Query 364204 CAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACAC 364262 ||||| || |||| || | ||| | | ||||| || || ||||| | ||||| | Sbjct 112851 CAGCAAAACATTGGCACTA-TCAAATGCTCTAACCTTTGCACTGAGATAGTGGAATATTC 112909 Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA 364322 | ||||| |||||||| || | || ||||| ||| | |||||| | Sbjct 112910 GTCGAAGGACGAAGTGGCCGTATGCAATTTGGCCTCGATTGCGTTGAACATGTTTGTGCA 112969 Query 364323 ---AGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACC--TATCATGCTACTTGC 364377 ||| |||| | || | || | || | || || || ||| || || || Sbjct 112970 GCCCGATCGTACGTACGATTTCGAGAAGCTGAAGGAGGTCGCCAAGATCGTG--ACACGC 113027 Query 364378 AATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAAT 364437 ||||| ||||| | || ||| ||| || || || | || ||||| |||| || || Sbjct 113028 AATCTTAACAAGATCATTGACGTGAACTACTACCCGGTGCCGGAAGCGAAGCGCTCGAAC 113087 Query 364438 ATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472 ||||| || || ||||| || | ||||| ||||| Sbjct 113088 ATGCGCCACCGTCCGATCGGCATCGGTGTCCAGGG 113122 Score = 268 bits (296), Expect = 2e-66 Identities = 701/1055 (66%), Gaps = 21/1055 (2%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||| || | ||||| || | |||||||||||||| |||||||| || ||||| ||| Sbjct 126788 ATCAAGGGAAAGATTGTCGAGAGACCGCAGCATATGTTGATGCGTGTCGCCATTGGCATC 126847 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 || || ||| |||| || ||||| || || || || || || | ||| || Sbjct 126848 CACGGCGAGGACATTGAGGCAGCGATCGAGACGTACAATCTGCTTTCAGAGCGTTACTTT 126907 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 || ||||| | || || |||| || | || | ||| ||| | ||||||||| Sbjct 126908 ACCCACGCTTCTCCGACCATGTTTGCGGCGGCCACACAGCGTCCTCAGCTTTCTTCTTGC 126967 Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 ||||| || | ||| ||||||| |||||| ||||||| || || || ||| | || Sbjct 126968 TTTCTGCTGACCATGTCGGACGATAGCATCGAAGGTATCTACGATACTCTAAAGCAATGC 127027 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGCAC 363727 || | || || || || || || || || || || | ||| | ||||| Sbjct 127028 GCATTGATCTCGAAATCGGCCGGTGGTATCGGACTGAATG--TGCACTGCATCCGTGCGA 127085 Query 363728 AGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786 || | ||||| |||||| | || || ||||| |||||||| || ||||| ||| Sbjct 127086 AGGGAACGTACATCTCCGGCACGAACGGTATT-TCGAACGGGCTGGTACCGATGCTACGT 127144 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 |||| |||| || || |||||||| || ||||| || |||||| ||| |||||| Sbjct 127145 GTGTACAACAACACGGCAAGGTACGTTGATCAGGGCGGTAATAAGCGCCCAGGCGCGTTT 127204 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 ||||| || ||||| || |||| ||| | ||||||||||| || || ||||||| Sbjct 127205 GCTATCTACCTCGAACCGTGGCATGGTGATGTGTTTGAGTTTCTGGATCTGAAGAAAAAC 127264 Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966 || || || ||||| | ||||| || ||| ||||||| || || ||| | | || | Sbjct 127265 ACCGGCAAGGAGGAGGTTCGTGCTCGGGATATGTTCTACGCTCTGTGGATACCGGATCTG 127324 Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCA 364026 || |||||||| |||||||| | | | ||| | | ||||| ||||| ||||| Sbjct 127325 TTCATGAAGCGTGTGGAGGCGAATGAAACGTGGAGTTTGATGTGCCCCCACGATTGTCCC 127384 Query 364027 GGTCTTTCCGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCGG 364084 || || ||||| |||||| || || | | ||| || ||| | || || | Sbjct 127385 GGGCTGGCCGATTCATGGGGCGAAGAGTTCGAGAAGCTGTACACGGGA--TACGAGAAAG 127442 Query 364085 AGGGAAAGGCTCGTAAGACAA-TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCG 364143 |||| | | || | ||| | || || | || |||||||| ||||| || || Sbjct 127443 AGGG-TCGCTTTATACGTCAAGTGAAGGCGCAAGATCTGTGGTTTGCGATCATCGAGTCA 127501 Query 364144 CAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAAC 364203 ||| | || || || ||| || ||| ||||||| ||| ||||||| ||||| |||| Sbjct 127502 CAGGTGGAAACGGGCGTACCGTACATGCTGTACAAGGATGCGTGCAATCGCAAAAGCAAC 127561 Query 364204 CAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACAC 364262 ||||| || |||| || | ||| | | ||||| || || ||||| | ||||| | Sbjct 127562 CAGCAAAACATTGGCACTA-TCAAATGCTCTAACCTTTGCACTGAGATAGTGGAATATTC 127620 Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA 364322 | ||||| |||||||| || | || ||||| ||| | |||||| | Sbjct 127621 GTCGAAGGACGAAGTGGCCGTATGCAATTTGGCCTCGATTGCGTTGAACATGTTTGTGCA 127680 Query 364323 ---AGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACC--TATCATGCTACTTGC 364377 ||| |||| | || | || | || | || || || ||| || || || Sbjct 127681 GCCCGATCGTACGTACGATTTCGAGAAGCTGAAGGAGGTCGCCAAGATCGTG--ACACGC 127738 Query 364378 AATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAAT 364437 ||||| ||||| | || ||| ||| || || || | || ||||| |||| || || Sbjct 127739 AATCTTAACAAGATCATTGACGTGAACTACTACCCGGTGCCGGAAGCGAAGCGCTCGAAC 127798 Query 364438 ATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGG 364472 ||||| || || ||||| || | ||||| ||||| Sbjct 127799 ATGCGCCACCGTCCGATCGGCATCGGTGTCCAGGG 127833 >seq12 Length=3202847 Score = 100 bits (110), Expect = 7e-16 Identities = 215/319 (67%), Gaps = 2/319 (1%) Strand=Plus/Minus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 ||||||| | || || || ||||| ||||||||||| |||||||| ||| | |||||||| Sbjct 246944 AGGTGATTTGGGGCCTGTGTACGGGTTTCAATGGCGACACTTTGGAGCAAAATACAAAAC 246885 Query 111548 CATGCACGACTCATATGATTCACAGGGAACTGATCAA-TTACAGAATGTCATTGATCAAA 111606 || ||| || | || || | || ||| || ||| | || || || | | Sbjct 246884 GTGCCATGACGATTACACTGGGCAAGGCATGGACCAACTTGCAG-AGGTAATCGACAAGA 246826 Query 111607 TTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGG 111666 |||| |||||||| |||||| || || ||||| || ||||| || | | Sbjct 246825 TTAAAAACAACCCGTACGATCGTCGAATCATCATGAGCGCCTGGAATCCGTCCGATATCC 246766 Query 111667 AAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGC 111726 || ||||| |||||||| || ||| || || |||| ||| | |||| Sbjct 246765 CTAATATGGCTCTTCCACCTTGCCATTGCTTGGCTCAATTTTTTGTTGATAACGGAGAAT 246706 Query 111727 TTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTG 111786 | |||||||| |||||||| ||||| || ||| | || | ||||| || || || || | Sbjct 246705 TATCATGCCAGATGTATCAACGATCGGCCGATGTGGGCTTGGGTGTACCATTCAACATCG 246646 Query 111787 CAAGTTACGCACTACTTAC 111805 |||| ||| | | ||||| Sbjct 246645 CAAGCTACTCGTTGCTTAC 246627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303348423242420