Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 7e-11 >seq1 Length=30017264 Score = 82.4 bits (90), Expect = 7e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || || || | || ||||| | || || | || || ||| | Sbjct 15159780 CAACATGCAAATCTTCGTCAAGACTCTGACCGGAAAGACCATCACGCTGGAGGTGGAG-C 15159722 Query 24047 CAACG-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 || || ||||||||||| | || || |||||| || || |||||||| ||||| | Sbjct 15159721 CATCGGACACCATCGAGAACGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCTCCGG 15159662 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 |||| ||| | ||||| | || ||| ||||| || ||||||| Sbjct 15159661 ATCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAAGATG 15159620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934375648050