Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 6e-13 >seq2 Length=22738934 Score = 89.7 bits (98), Expect = 6e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 38445 TGGCCCAAGAGCATGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATTCG 38504 ||||||| | |||||||||| ||||| ||| || ||| |||||||| | ||| | Sbjct 17776311 TGGCCCACGTCGATGAAGCAGAAACCGCAGCAGCTGAGCGATGCCGGCTTTTTCTACACC 17776252 Query 38505 GGCACCGGAGACCAGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGCCT 38564 || | | |||| ||||| || || |||||||| || || ||||||||||||| Sbjct 17776251 GGAAAGAGCGACCGCGTCAAGTGCTTTAGCTGCGGCGGTGGGCTGAAGGACTGGGAGCAG 17776192 Query 38565 GCGGACGATCCGTGGGCGCAGCACGCGCGCTGGT 38598 | || || ||||||| ||||||||| ||||| Sbjct 17776191 GACGATGAGCCGTGGGAGCAGCACGCCATCTGGT 17776158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537601116787600