Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq14 246 3e-60
seq4 129 5e-25
seq9 98.7 8e-16
>seq14
Length=2944040
Score = 246 bits (272), Expect = 3e-60
Identities = 839/1281 (65%), Gaps = 41/1281 (3%)
Strand=Plus/Minus
Query 128809 GCCGGCTTGGTGCGCAAATAGTACATGCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATG 128868
|||||||| |||||||||||||||||||| || |||||||| | ||||| | ||| | |
Sbjct 128544 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAG 128485
Query 128869 TGAATCGTGGTCAACAATGCGTAGGTGGGTTGACTCaaaaaaaTATTAAATGATTGACTT 128928
|| |||| ||| | ||||| |||||| || || || || |||||
Sbjct 128484 TGGATCGAGGTTAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGAC 128425
Query 128929 TGATCAATAAAGGGGCCGCGATCGGCAGCCATACCAATCAAATTTTTCACTTTCATTTCC 128988
|| || || || | || |||||||| ||||| || | |||| || || |||
Sbjct 128424 TGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCACGTTTTAACCGATATCTCC 128365
Query 128989 CACACCGTTTTGTAAAGCTCTCTCACGTGTTTTGGTATTTCTTCAATGTTCTGCA-CGCT 129047
|| ||||||||||| || || | ||||| |||||||||| || || ||||| | || |
Sbjct 128364 CAAACCGTTTTGTACAGATCGCGCACGTCCTTTGGTATTTTCTCTATTTTCTGGATCGAT 128305
Query 129048 GCCGTTGTTTGCAATAATTTTGTTTCGCATCTGTTCGTTGTACAAATTCAGTTTGATCAA 129107
||||||| ||| | ||| ||||| ||| | |||| ||| | | || |||
Sbjct 128304 -CCGTTGTGTGCCAGAATGGTGTTTTTCATTTCATCGTCCCACAGACCGTGCGTGGTCAG 128246
Query 129108 ATCGTCGGTCAAGTATTTGTTTATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTA 129167
|| | | ||| | | ||||| || ||||| || |||| | || || || |||
Sbjct 128245 GTCCTTGATCAGATGATGGTTTACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTA 128186
Query 129168 AATGTTGTTGGTGAACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGC 129227
| ||| ||| |||| || ||||| ||||||||||| | ||||||||| || | ||
Sbjct 128185 GACGTTCGACGTGTACGGTTCGAACGACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGC 128126
Query 129228 GGTGGGCATGTAAGCCACGCA-AAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCttttt 129286
|| ||||| || | ||| || ||||| || | ||||||| | ||| | || |
Sbjct 128125 TGTTGGCATCGGTGCTA-GCAGCAGTGAGTTACGAATGCCGTGCTTTGCAATCTTTTCCT 128067
Query 129287 ttAATTGTGTCCAGTCCCACATCGAT--GTGGGTGTGTGATTCCACAAGTCGTATTGCAA 129344
| || ||| | ||||| ||| || ||| | ||||||| |||||| ||||
Sbjct 128066 TCAACGCCACCCAATTCCACA--GATCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAG 128009
Query 129345 TATACCCAAACTGGCGGGACTGGAAAAGTAGGAATCGTGCACGCCGTAAGCTT--TTGCC 129402
|| ||| || | |||| ||| | |||| ||| | | ||| |||
Sbjct 128008 AATGCCCTTGCTTACCGGACAACCTTCGTACGTCTCGT--ACGGCCCATCCTTGGCGGCC 127951
Query 129403 AATTCGCAACTCGCTTCCAATGCGCCAAAATAAATTGTTTCGGCAAT-TTTGGTGTTCAA 129461
|||||||| || ||||||| || ||| | || || ||||| ||| |||| || | ||
Sbjct 127950 AATTCGCAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTC--AAATATTTGCTGATTAA 127893
Query 129462 CACTTTG-GCCTGGTCGCTTTCGTACGGCATACGCAACATGGCAAATGTGTCGGCCAAAC 129520
| || || || || || |||||||| | | || || || | ||||||| ||
Sbjct 127892 GCTTCTGCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATAC 127833
Query 129521 CTTGAATACCCACACCGATGGGTCGATGTTTTCTATTGGA---TTTTTGTGCCGACAACA 129577
| || | ||| | ||||| || || || | || || || | ||| || |
Sbjct 127832 CCTGGACACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACC- 127774
Query 129578 AGGGATAGTAGTTGATGTCTATAATTTTGTTTAAATT-CTTGACCACAATTTTCGTTACG 129636
|| |||||||| | ||| || || ||||| | ||| | || ||| || || | ||
Sbjct 127773 --GGGTAGTAGTTCACGTCAATGATCTTGTTAAGATTGCGTG-TCACGATCTTGGCGACC 127717
Query 129637 TATTTTAACATTTCAAAATTGTACTCGCCTAC-ATCGATGTCGACAAA-TTGATTGACAC 129694
| || | | | || |||| ||| | ||| |||| | ||||| || | || |
Sbjct 127716 TCCTTCAGCTTCTCGAAATCGTA----CGTACGATCGGGCTGCACAAACATGTTCAACGC 127661
Query 129695 AAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGG 129754
|||||||||||||||||| ||||| ||||| || || || || || || |
Sbjct 127660 -AATCGAGGCCAAATTGCATACGGCCACTTCGTCCTTCGACGAATATTCCACTATCTCAG 127602
Query 129755 CGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTT--TGATTACTTTTCATGTTGCA 129812
||| | ||| ||| || ||||| |||| ||| || || ||||| |||||
Sbjct 127601 TGCAAAGGTTAGAGCATTTGATAGTGCC--AATGTTTTGCTGGTTGCTTTTGCGATTGCA 127544
Query 129813 AGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCT 129872
||||| ||||||| ||||||||| ||||||||| || || | |||| || |
Sbjct 127543 CGCATCCTTGTACAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAA 127484
Query 129873 GAACAAGTCTCGAGCCTTGATCTGTCTTACAAATTTGCCACATTTCTCGTATGCCACATA 129932
||| ||| | ||||| | || | || ||| || |||||||||| || ||
Sbjct 127483 CCACAGATCTTGCGCCTTCACTTGACGTATAAAGCGACCCTCTTTCTCGTATCCCGTGTA 127424
Query 129933 CAGTTGTTCAAATTCT--GAGCCGTGTA-CGGTGTCGAGCAACGGCGATTCACGCGGACA 129989
||| | || || ||| | || || | ||| | ||| || | || | || ||
Sbjct 127423 CAGCTTCTCGAACTCTTCGCCCCATGAATCGG---CCAGCCCGGGACAATCGTGGGGGCA 127367
Query 129990 CATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAG 130049
||||||||||||| || ||| ||| || || || ||||| |||| ||| |||| ||||||
Sbjct 127366 CATCAAACTCCACGTTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAG 127307
Query 130050 GGCGTACAACAAATCTCGCGC 130070
||||| |||| ||| || ||
Sbjct 127306 AGCGTAGAACATATCCCGAGC 127286
Score = 242 bits (268), Expect = 3e-59
Identities = 838/1281 (65%), Gaps = 41/1281 (3%)
Strand=Plus/Minus
Query 128809 GCCGGCTTGGTGCGCAAATAGTACATGCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATG 128868
|||||||| |||||||||||||||||||| || |||||||| | ||||| | || | |
Sbjct 113833 GCCGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTAAAAG 113774
Query 128869 TGAATCGTGGTCAACAATGCGTAGGTGGGTTGACTCaaaaaaaTATTAAATGATTGACTT 128928
|| |||| ||| | ||||| |||||| || || || || |||||
Sbjct 113773 TGGATCGAGGTTAGTTTACCGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGAC 113714
Query 128929 TGATCAATAAAGGGGCCGCGATCGGCAGCCATACCAATCAAATTTTTCACTTTCATTTCC 128988
|| || || || | || |||||||| ||||| || | |||| || || |||
Sbjct 113713 TGGTCGATGAACGCTCCACGATCGGCCGCCATTTGGATGCACGTTTTAACCGATATCTCC 113654
Query 128989 CACACCGTTTTGTAAAGCTCTCTCACGTGTTTTGGTATTTCTTCAATGTTCTGCA-CGCT 129047
|| ||||||||||| || || | ||||| |||||||||| || || ||||| | || |
Sbjct 113653 CAAACCGTTTTGTACAGATCGCGCACGTCCTTTGGTATTTTCTCTATTTTCTGGATCGAT 113594
Query 129048 GCCGTTGTTTGCAATAATTTTGTTTCGCATCTGTTCGTTGTACAAATTCAGTTTGATCAA 129107
||||||| ||| | ||| ||||| ||| | |||| ||| | | || |||
Sbjct 113593 -CCGTTGTGTGCCAGAATGGTGTTTTTCATTTCATCGTCCCACAGACCGTGCGTGGTCAG 113535
Query 129108 ATCGTCGGTCAAGTATTTGTTTATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTA 129167
|| | | ||| | | ||||| || ||||| || |||| | || || || |||
Sbjct 113534 GTCCTTGATCAGATGATGGTTTACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTA 113475
Query 129168 AATGTTGTTGGTGAACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGC 129227
| ||| ||| |||| || ||||| ||||||||||| | ||||||||| || | ||
Sbjct 113474 GACGTTCGACGTGTACGGTTCGAACGACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGC 113415
Query 129228 GGTGGGCATGTAAGCCACGCA-AAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCttttt 129286
|| ||||| || | ||| || ||||| || | ||||||| | ||| | || |
Sbjct 113414 TGTTGGCATCGGTGCTA-GCAGCAGTGAGTTACGAATGCCGTGCTTTGCAATCTTTTCCT 113356
Query 129287 ttAATTGTGTCCAGTCCCACATCGAT--GTGGGTGTGTGATTCCACAAGTCGTATTGCAA 129344
| || ||| | ||||| ||| || ||| | ||||||| |||||| ||||
Sbjct 113355 TCAACGCCACCCAATTCCACA--GATCCGTCGGTTCCTTGTTCCACATGTCGTACTGCAG 113298
Query 129345 TATACCCAAACTGGCGGGACTGGAAAAGTAGGAATCGTGCACGCCGTAAGCTT--TTGCC 129402
|| ||| || | |||| ||| | |||| ||| | | ||| |||
Sbjct 113297 AATGCCCTTGCTTACCGGACAACCTTCGTACGTCTCGT--ACGGCCCATCCTTGGCGGCC 113240
Query 129403 AATTCGCAACTCGCTTCCAATGCGCCAAAATAAATTGTTTCGGCAAT-TTTGGTGTTCAA 129461
|||||||| || ||||||| || ||| | || || ||||| ||| |||| || | ||
Sbjct 113239 AATTCGCAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTC--AAATATTTGCTGATTAA 113182
Query 129462 CACTTTG-GCCTGGTCGCTTTCGTACGGCATACGCAACATGGCAAATGTGTCGGCCAAAC 129520
| || || || || || |||||||| | | || || || | ||||||| ||
Sbjct 113181 GCTTCTGCGCTTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCATAC 113122
Query 129521 CTTGAATACCCACACCGATGGGTCGATGTTTTCTATTGGA---TTTTTGTGCCGACAACA 129577
| || | ||| | ||||| || || || | || || || | ||| || |
Sbjct 113121 CCTGGACACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACC- 113063
Query 129578 AGGGATAGTAGTTGATGTCTATAATTTTGTTTAAATT-CTTGACCACAATTTTCGTTACG 129636
|| |||||||| | ||| || || ||||| | ||| | || ||| || || | ||
Sbjct 113062 --GGGTAGTAGTTCACGTCAATGATCTTGTTAAGATTGCGTG-TCACGATCTTGGCGACC 113006
Query 129637 TATTTTAACATTTCAAAATTGTACTCGCCTAC-ATCGATGTCGACAAA-TTGATTGACAC 129694
| || | | | || |||| ||| | ||| |||| | ||||| || | || |
Sbjct 113005 TCCTTCAGCTTCTCGAAATCGTA----CGTACGATCGGGCTGCACAAACATGTTCAACGC 112950
Query 129695 AAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGG 129754
|||||||||||||||||| ||||| ||||| || || || || || || |
Sbjct 112949 -AATCGAGGCCAAATTGCATACGGCCACTTCGTCCTTCGACGAATATTCCACTATCTCAG 112891
Query 129755 CGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTT--TGATTACTTTTCATGTTGCA 129812
||| | ||| ||| || ||||| |||| ||| || || ||||| |||||
Sbjct 112890 TGCAAAGGTTAGAGCATTTGATAGTGCC--AATGTTTTGCTGGTTGCTTTTGCGATTGCA 112833
Query 129813 AGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCT 129872
||||| ||||||| ||||||||| ||||||||| || || | |||| || |
Sbjct 112832 CGCATCCTTGTACAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGATCGCAAA 112773
Query 129873 GAACAAGTCTCGAGCCTTGATCTGTCTTACAAATTTGCCACATTTCTCGTATGCCACATA 129932
||| ||| | ||||| | || | || ||| || |||||||||| || ||
Sbjct 112772 CCACAGATCTTGCGCCTTCACTTGACGTATAAAGCGACCCTCTTTCTCGTATCCCGTGTA 112713
Query 129933 CAGTTGTTCAAATTCT--GAGCCGTGTA-CGGTGTCGAGCAACGGCGATTCACGCGGACA 129989
||| | || || ||| | || || | ||| | ||| || | || | || ||
Sbjct 112712 CAGCTTCTCGAACTCTTCGCCCCATGAATCGG---CCAGCCCGGGACAATCGTGGGGGCA 112656
Query 129990 CATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAG 130049
||||||||||||| || ||| ||| || || || ||||| |||| ||| |||| ||||||
Sbjct 112655 CATCAAACTCCACGTTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAG 112596
Query 130050 GGCGTACAACAAATCTCGCGC 130070
||||| |||| ||| || ||
Sbjct 112595 AGCGTAGAACATATCCCGAGC 112575
>seq4
Length=15719670
Score = 129 bits (142), Expect = 5e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || || || ||||| | || ||||| || | || ||||| || || ||
Sbjct 4750785 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 4750726
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||||| | || || | || ||| || || |||||||||||||| || || |||
Sbjct 4750725 TCGGATACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAGGGTATCCCGCCGGAT 4750666
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || |||||||| ||| | |||||| |||||| | |||||||||
Sbjct 4750665 CAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGATTAC 4750606
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || ||| | ||| | || | || ||||||| |||
Sbjct 4750605 AATATCCAGAAGGAGTCGACCCTTCATCTGGTGCTTCGCCTGCGCGGTGGT 4750555
>seq9
Length=6651167
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | || || || || ||||||| || || || | |
Sbjct 534807 ATGCAGATTTTCGTGAAGACGCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCGTCG 534748
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | |||| || || || ||||||||||| || || || |||||
Sbjct 534747 GATACGATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 534688
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || |||||||| ||| | ||||| ||||| | ||||| ||||||
Sbjct 534687 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAAC 534628
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || || ||| | || || ||| | || | ||||| ||
Sbjct 534627 ATCCAGAAGGAGTCGACCCTCCACTTGGTTCTTCGGCTTCGCGGTGG 534581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419726414215150
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