Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq19 95.1 2e-14
seq7 93.3 9e-14
seq5 93.3 9e-14
seq3 93.3 9e-14
seq4 91.5 3e-13
seq2 91.5 3e-13
seq1 91.5 3e-13
seq18 89.7 1e-12
seq15 89.7 1e-12
>seq19
Length=1744624
Score = 95.1 bits (104), Expect = 2e-14
Identities = 211/312 (68%), Gaps = 6/312 (2%)
Strand=Plus/Plus
Query 218565 GCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGC 218624
||| || || || || || |||| || | ||||| ||||| ||| | || ||| |
Sbjct 912055 GCGCTCGATCCCGTGCATGCTGGACGGGTTGAAGCCGGGCCAGCGGAAGGTGCTGTTTAC 912114
Query 218625 CGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATC 218684
|||||||| ||| | || | ||||| || ||||| | |||| || |
Sbjct 912115 GTGCTTCAAGCGTAACGACAAGCGCGAGGTGAAGGTGGCCCAGTTGGCAGGTTCGGTGGC 912174
Query 218685 CGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCC-ATTGTAGGCATGG 218743
||||| || | ||||||||||| |||||| || | | | | || | | |||
Sbjct 912175 GGAAATGTCCGCGTACCATCACGGCGAGCAGTCGCT-CTGTTCGACGATCATCAACCTGG 912233
Query 218744 CACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTT 218803
| ||| |||| || ||||| |||||||| ||| ||||| ||| |||||||||||||
Sbjct 912234 CGCAGAACTACGTCGGCAGCAACAACATCAACCTGCTGTACCCGGGCGGTCAGTTTGGTA 912293
Query 218804 CTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCC--AGGTATATCTTTACAAAGTTGTC 218861
| || | ||| || |||||||| || | ||| ||||| ||||| || | | ||||
Sbjct 912294 CGCGGTTGACGGGCGGTAAGGATAGCGC--CAGCCCGAGGTACATCTTCACGATGATGTC 912351
Query 218862 GCCCGTGACGCG 218873
| || |||||||
Sbjct 912352 GGCCCTGACGCG 912363
Score = 84.2 bits (92), Expect = 4e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895
|||||| ||||||||||| ||||||||||| || ||| |||| | || || |
Sbjct 911278 CTGCACGCTCATCCTGACCGAGGGAGACTCGGCCAAAACGTTGGCCGTGTCGGGGCTGGG 911337
Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955
||||| || || || | ||| ||| | || || || || ||||||||||| ||||||||
Sbjct 911338 GGTGGTCGGACGCGACACGTACGGTGTGTTTCCGCTGCGCGGTAAGCTGCTGAACGTGCG 911397
Query 217956 CGATGC 217961
||| ||
Sbjct 911398 CGAAGC 911403
>seq7
Length=7675037
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559
|| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 5458039 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 5458098
Query 142560 GAGCCCCACATCGGGC 142575
||||||||| | ||||
Sbjct 5458099 GAGCCCCACGTTGGGC 5458114
>seq5
Length=12895223
Score = 93.3 bits (102), Expect = 9e-14
Identities = 75/91 (82%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 2280536 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2280477
Query 142564 CCCACATCGGGCAGAAGTCGCCGTCTTTTGA 142594
||||| | |||| || | | || ||||||
Sbjct 2280476 CCCACGTTGGGCGAAAATGACAGTATTTTGA 2280446
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 3597562 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3597621
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 3597622 CCCCACGTTGGGC 3597634
Score = 86.0 bits (94), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 3647837 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3647778
Query 142564 CCCAC 142568
|||||
Sbjct 3647777 CCCAC 3647773
>seq3
Length=16089237
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559
|| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 4530113 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 4530054
Query 142560 GAGCCCCACATCGGGC 142575
||||||||| | ||||
Sbjct 4530053 GAGCCCCACGTTGGGC 4530038
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559
|| ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 4532017 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 4532076
Query 142560 GAGCCCCACATCGGGC 142575
||||||||| | ||||
Sbjct 4532077 GAGCCCCACGTTGGGC 4532092
Score = 93.3 bits (102), Expect = 9e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 4544769 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4544710
Query 142563 CCCCACATCGGGCAGA 142578
|||||| | |||| ||
Sbjct 4544709 CCCCACGTTGGGCGGA 4544694
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 4569126 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4569185
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 4569186 CCCCACGTTGGGC 4569198
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 4061335 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4061276
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 4061275 CCCACGTTGGGC 4061264
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 15381550 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 15381609
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 15381610 CCCACGTTGGGC 15381621
>seq4
Length=15719670
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 5319407 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5319348
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 5319347 CCCCACGTTGGGC 5319335
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 8053240 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 8053299
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 8053300 CCCCACGTTGGGC 8053312
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 11777698 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 11777757
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 11777758 CCCCACGTTGGGC 11777770
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 5323442 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5323501
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 5323502 CCCACGTTGGGC 5323513
>seq2
Length=22738934
Score = 91.5 bits (100), Expect = 3e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 8126620 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 8126561
Query 142564 CCCACATCGGGCAGA 142578
||||| | |||| ||
Sbjct 8126560 CCCACGTTGGGCGGA 8126546
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 17548635 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 17548576
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 17548575 CCCACGTTGGGC 17548564
>seq1
Length=30017264
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 17030207 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 17030148
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 17030147 CCCCACGTTGGGC 17030135
>seq18
Length=1856345
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1571804 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1571863
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 1571864 CCCACGTTGGGC 1571875
>seq15
Length=2584459
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1141554 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1141495
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 1141494 CCCACGTTGGGC 1141483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027832717560710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |