Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq19 95.1 2e-14 seq7 93.3 9e-14 seq5 93.3 9e-14 seq3 93.3 9e-14 seq4 91.5 3e-13 seq2 91.5 3e-13 seq1 91.5 3e-13 seq18 89.7 1e-12 seq15 89.7 1e-12 >seq19 Length=1744624 Score = 95.1 bits (104), Expect = 2e-14 Identities = 211/312 (68%), Gaps = 6/312 (2%) Strand=Plus/Plus Query 218565 GCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGC 218624 ||| || || || || || |||| || | ||||| ||||| ||| | || ||| | Sbjct 912055 GCGCTCGATCCCGTGCATGCTGGACGGGTTGAAGCCGGGCCAGCGGAAGGTGCTGTTTAC 912114 Query 218625 CGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATC 218684 |||||||| ||| | || | ||||| || ||||| | |||| || | Sbjct 912115 GTGCTTCAAGCGTAACGACAAGCGCGAGGTGAAGGTGGCCCAGTTGGCAGGTTCGGTGGC 912174 Query 218685 CGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCC-ATTGTAGGCATGG 218743 ||||| || | ||||||||||| |||||| || | | | | || | | ||| Sbjct 912175 GGAAATGTCCGCGTACCATCACGGCGAGCAGTCGCT-CTGTTCGACGATCATCAACCTGG 912233 Query 218744 CACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTT 218803 | ||| |||| || ||||| |||||||| ||| ||||| ||| ||||||||||||| Sbjct 912234 CGCAGAACTACGTCGGCAGCAACAACATCAACCTGCTGTACCCGGGCGGTCAGTTTGGTA 912293 Query 218804 CTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCC--AGGTATATCTTTACAAAGTTGTC 218861 | || | ||| || |||||||| || | ||| ||||| ||||| || | | |||| Sbjct 912294 CGCGGTTGACGGGCGGTAAGGATAGCGC--CAGCCCGAGGTACATCTTCACGATGATGTC 912351 Query 218862 GCCCGTGACGCG 218873 | || ||||||| Sbjct 912352 GGCCCTGACGCG 912363 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895 |||||| ||||||||||| ||||||||||| || ||| |||| | || || | Sbjct 911278 CTGCACGCTCATCCTGACCGAGGGAGACTCGGCCAAAACGTTGGCCGTGTCGGGGCTGGG 911337 Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955 ||||| || || || | ||| ||| | || || || || ||||||||||| |||||||| Sbjct 911338 GGTGGTCGGACGCGACACGTACGGTGTGTTTCCGCTGCGCGGTAAGCTGCTGAACGTGCG 911397 Query 217956 CGATGC 217961 ||| || Sbjct 911398 CGAAGC 911403 >seq7 Length=7675037 Score = 93.3 bits (102), Expect = 9e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559 || ||||||| |||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 5458039 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 5458098 Query 142560 GAGCCCCACATCGGGC 142575 ||||||||| | |||| Sbjct 5458099 GAGCCCCACGTTGGGC 5458114 >seq5 Length=12895223 Score = 93.3 bits (102), Expect = 9e-14 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2280536 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2280477 Query 142564 CCCACATCGGGCAGAAGTCGCCGTCTTTTGA 142594 ||||| | |||| || | | || |||||| Sbjct 2280476 CCCACGTTGGGCGAAAATGACAGTATTTTGA 2280446 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 3597562 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3597621 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 3597622 CCCCACGTTGGGC 3597634 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 3647837 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3647778 Query 142564 CCCAC 142568 ||||| Sbjct 3647777 CCCAC 3647773 >seq3 Length=16089237 Score = 93.3 bits (102), Expect = 9e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559 || ||||||| |||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 4530113 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 4530054 Query 142560 GAGCCCCACATCGGGC 142575 ||||||||| | |||| Sbjct 4530053 GAGCCCCACGTTGGGC 4530038 Score = 93.3 bits (102), Expect = 9e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559 || ||||||| |||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 4532017 GACAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 4532076 Query 142560 GAGCCCCACATCGGGC 142575 ||||||||| | |||| Sbjct 4532077 GAGCCCCACGTTGGGC 4532092 Score = 93.3 bits (102), Expect = 9e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 4544769 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4544710 Query 142563 CCCCACATCGGGCAGA 142578 |||||| | |||| || Sbjct 4544709 CCCCACGTTGGGCGGA 4544694 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 4569126 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4569185 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 4569186 CCCCACGTTGGGC 4569198 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 4061335 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4061276 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 4061275 CCCACGTTGGGC 4061264 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 15381550 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 15381609 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 15381610 CCCACGTTGGGC 15381621 >seq4 Length=15719670 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 5319407 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5319348 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5319347 CCCCACGTTGGGC 5319335 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 8053240 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 8053299 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 8053300 CCCCACGTTGGGC 8053312 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 11777698 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 11777757 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 11777758 CCCCACGTTGGGC 11777770 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 5323442 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5323501 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 5323502 CCCACGTTGGGC 5323513 >seq2 Length=22738934 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 8126620 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 8126561 Query 142564 CCCACATCGGGCAGA 142578 ||||| | |||| || Sbjct 8126560 CCCACGTTGGGCGGA 8126546 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 17548635 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 17548576 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 17548575 CCCACGTTGGGC 17548564 >seq1 Length=30017264 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 17030207 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 17030148 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 17030147 CCCCACGTTGGGC 17030135 >seq18 Length=1856345 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1571804 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1571863 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1571864 CCCACGTTGGGC 1571875 >seq15 Length=2584459 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1141554 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1141495 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1141494 CCCACGTTGGGC 1141483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027832717560710