Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2 176 8e-39
seq1 172 1e-37
seq4 158 2e-33
seq3 95.1 2e-14
>seq2
Length=22738934
Score = 176 bits (194), Expect = 8e-39
Identities = 318/465 (68%), Gaps = 0/465 (0%)
Strand=Plus/Plus
Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317
||||||||||||||| ||||| || |||||||| || ||||| | || | || ||
Sbjct 20260572 CCACATTGCTTCGACGTAGTCTTTTGCGTGGCCCCAGTCACGCTTCGAATCGAGATTACC 20260631
Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCG 268377
||| | ||| | ||||| ||||||| | || | |||||||||||| ||
Sbjct 20260632 GAGCTCGACGCACTCCTGCTGGCCGAGCGAAATCTTCGCCACCGAGCGAGTGATTTTACG 20260691
Query 268378 GGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGC 268437
||||| || |||| || || | || ||||||||| ||||| || |||||||| ||
Sbjct 20260692 CGTCACAAAGTTCTCACCTCGCCGGGGCGACTCGTGGTTAAAGAGAATACCGTTGCAAGC 20260751
Query 268438 GAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAAC 268497
|||||| || ||||| || || || | || ||||||| | |||| || |||
Sbjct 20260752 AAACATGTTGTACGCCTCGCGATAATTGATCACTATCCAGTAGCCGTACATTTTCGCACA 20260811
Query 268498 TGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTT 268557
|||||||| || || |||| ||| || || | || || || |||| || ||
Sbjct 20260812 CGCGTACGGCGATCGCGGATAGAATGGAGTTTTTTCGTTCTGCGGCGTTTCGACCACCTT 20260871
Query 268558 GCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGAT 268617
|||| |||| ||||| || || ||||||||||| || || || | || | |
Sbjct 20260872 GCCATAGAGTTCGGACGTGGACGCTTGGTAGAAGCGGACCGTCTTCTCCTGTCCAACGGT 20260931
Query 268618 TCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGG 268677
||||| || || |||| || || || || | ||||||| ||||| ||||| ||
Sbjct 20260932 ACGGATGGCATCAAGCAGCCGCAGCGTACCGACCGCATCCACTTCCGCCGTATATTCGCT 20260991
Query 268678 CATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATA 268722
|| ||||| || | || ||||||||| || ||| | ||||| ||
Sbjct 20260992 CAGGTCGAACGAGATCTTGACATGGCTTTGCGCGGCAAGGTTGTA 20261036
>seq1
Length=30017264
Score = 172 bits (190), Expect = 1e-37
Identities = 179/235 (76%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
||||| ||||| || || || | |||| ||| || |||||||| || ||||| || |
Sbjct 15159542 TTTAAAAGCCTCCACGCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATATTGT 15159601
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
| || || || || | |||||||| | |||||| |||||||| || || | || || |
Sbjct 15159602 AGTCTGACAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGAT 15159661
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
| || || ||||||||||| || |||||||| ||||| ||| |||||||||||| | ||
Sbjct 15159662 CCGGAGGGATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCCGATG 15159721
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||| |||||||| ||||| || || ||||||||||| || |||||
Sbjct 15159722 GCTCCACCTCCAGCGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATTTGCAT 15159776
Score = 109 bits (120), Expect = 1e-18
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || ||||| || || |||||||| || || || || | | | ||||| || |||
Sbjct 15157291 TGGAGAGTGGAATCCTTCTGGATGTTGTAGTCTGACAGAATACGTCTATCTTTCAAATGC 15157350
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
| ||| ||| | || | || || || || || ||||||||||| | |||||||||
Sbjct 15157351 ATTCCGCTGAAGACCAGACGCTGGTGATCCGGAGGGATGCCTTCCTTACCCTGAATCTTT 15157410
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
||||| ||| |||||||||||| | | ||||| |||| |||||||| ||||| |
Sbjct 15157411 GCCTTCACGATCTCGATGGTGTCCGACGGCTCTACCTCCAGCGTGATGGTCTTTCCGTTC 15157470
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
| || |||||||| || || ||
Sbjct 15157471 ATAGTTTTGACGAAGATTTGTAT 15157493
Score = 107 bits (118), Expect = 4e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 68267 GGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGC 68326
||| || || ||||| || || || || || | | |||||||| | | ||| |||||
Sbjct 15157071 GGATTCCTTCTGGATATTGTAGTCTGATAGGGCACGGCCATCTTCCAGATACTTTCCGGC 15157130
Query 68327 GAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGAC 68386
||| || || || | | || |||||||||| | |||||||| ||||| ||
Sbjct 15157131 GAAGTAAAGATACTGCTGATACGAAGGCGTGCCTTCCTTAACCTGAATCTTAGCCTTCAC 15157190
Query 68387 GGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTT 68446
| |||||||||||| | || ||| ||||||| |||||||| ||||| || || || ||
Sbjct 15157191 GATCTCGATGGTGTCCGATGGTTCAACTTCCAGCGTGATGGTCTTTCCGGTCAGAGTTTT 15157250
Query 68447 GACGAATATCTGCA 68460
|||||| || ||||
Sbjct 15157251 GACGAAGATTTGCA 15157264
Score = 100 bits (110), Expect = 5e-16
Identities = 96/123 (78%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 68339 TTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGT 68398
|||||| || | || |||||||||||||| |||||||| ||||| ||| |||||||||
Sbjct 15156915 TTGTTGATCCGCAGGGATGCCTTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGT 15156974
Query 68399 GTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTG 68458
||| | || || || |||| |||||||| ||||| || || ||||| | || || ||
Sbjct 15156975 GTCCGATGGCTCCACCTCCAGCGTGATGGTCTTTCCGGTCAGAGTCTTAATAAAGATTTG 15157034
Query 68459 CAT 68461
|||
Sbjct 15157035 CAT 15157037
>seq4
Length=15719670
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| ||||| | |||| || || || ||||| || ||||| || ||||||||
Sbjct 4750556 CCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGAC 4750615
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| ||||| | || || || || ||
Sbjct 4750616 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGG 4750675
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||||||||| || |||||| || || | | || ||
Sbjct 4750676 ATACCCTCCTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 4750735
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||| ||||| || ||||||||||| |||||||| ||||||||
Sbjct 4750736 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 4750782
Score = 136 bits (150), Expect = 7e-27
Identities = 170/233 (73%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288
|| || || || || || || | |||| ||| || ||||| || || |||||||| ||
Sbjct 15451531 TACTTACCACCACGGAGTCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAG 15451472
Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348
|| || || || | ||||| || | |||||| |||||||| || || | || || ||
Sbjct 15451471 TCCGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCC 15451412
Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408
|| || || ||||||||||| || ||||| ||||| || ||||| ||||| | |
Sbjct 15451411 GGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGC 15451352
Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||||| || ||||| || || ||||| ||||||||
Sbjct 15451351 TCGACCTCAAGAGTGATGGTTTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 15451299
>seq3
Length=16089237
Score = 95.1 bits (104), Expect = 2e-14
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 195991 TTGGGTCGTCTTTGACGAAATCCACTACATGTCCGACGATGCGCGTGGTACCGTGTGGGA 196050
|||||| | ||||||||||| ||||||||| |||| | | ||||||| ||||||||
Sbjct 15590512 TTGGGTGATTTTTGACGAAATTCACTACATGCGCGACAAGGAGCGTGGTGTGGTGTGGGA 15590571
Query 196051 AGAAAGCCTTATCCTCATCCCGGATACCATCCGCTGTGTCTTTTTGTCCGCGACTGTTCC 196110
||||| |||||||| | ||||| | | | | || || || |||||||||| | ||
Sbjct 15590572 AGAAACGCTTATCCTGCTGCCGGACAACGTGCACTACGTGTTCCTGTCCGCGACGATCCC 15590631
Query 196111 CAACGCCCGTGACTTTGCCTTGTGG 196135
||||| || | |||||| ||||
Sbjct 15590632 GAACGCACGGCAGTTTGCCGAGTGG 15590656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921618828713200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |