Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq9 113 1e-21
>seq9
Length=6651167
Score = 113 bits (124), Expect = 1e-21
Identities = 214/313 (68%), Gaps = 9/313 (3%)
Strand=Plus/Minus
Query 3198 CTGCGAGCTGCTAAACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCTTTAT 3257
|||||||||||||||||| |||||||| ||| |||||| | ||||||| | || |
Sbjct 5827343 CTGCGAGCTGCTAAACTTCGTCAACGTGCTCGGACAGATCTACTTCATGGACTTTTTCCT 5827284
Query 3258 AGGCGAAGACTTTTTGTTGTACGGAATCTATGTTACCTTCTTCAACCAG---GAAGCCGC 3314
| || ||| || | |||||| | | |||| ||||| | || ||| |||
Sbjct 5827283 GGACGGAGAGTTCACGACGTACGGTAGCGATGTGGTGCGCTTCACCGAGATGGAACCCGA 5827224
Query 3315 CCATCCGAACATGACGAACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTT 3374
|| | || ||| || ||| ||| || ||||| | | | || ||||| ||
Sbjct 5827223 G-----GAGCGTGGCGATCCG-ATGGCGCGCGTGTTTCCGAAAGTGACCAAGTGTACCTT 5827170
Query 3375 TCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGA 3434
||||| |||||||| || || || | || | ||| || || ||| | | |||
Sbjct 5827169 CCACAAGTACGGTCCGTCCGGTAGTGTGCAGAAGTTCGACGGTCTGTGCGTGTTGCCGCT 5827110
Query 3435 GAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCCAT 3494
|||| | |||||||||||||||||| | ||||| |||||||||||| |||| ||||
Sbjct 5827109 GAACATCGTCAACGAGAAGATCTACGTGTTCCTGTGGTTCTGGTTCATTCTGCTGACCAT 5827050
Query 3495 CATCAGCGGTATC 3507
| ||| ||| |||
Sbjct 5827049 CCTCACCGGCATC 5827037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12479957685000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |