Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq2 302 8e-77
seq14 242 7e-59
>seq2
Length=22738934
Score = 302 bits (334), Expect = 8e-77
Identities = 430/601 (72%), Gaps = 7/601 (1%)
Strand=Plus/Minus
Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482
|| ||||||||||||||||| ||||| || || |||||||| |||| | ||||
Sbjct 19672464 CTTGCCTTCTTCGCCGCCTCGGACGGTATCGTAAATGAGAATCTGGTGGAGCGCTTCAGC 19672405
Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542
| ||||||||| ||||| |||||||||||||| || ||||| || || ||||||
Sbjct 19672404 CAGGAGGTGCAGGTGACGGAGGCCCGCTGCTTCTACGGGTTTCAGATTGCGATGGAGAAC 19672345
Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602
|||||| || ||||| | ||| || |||||||||| | || || |||||
Sbjct 19672344 GTGCACAGCGAAATGTACTCGCTGCTGATCGACACGTACATACGCGACCCGAAGGAGCGG 19672285
Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662
| |||||||| || || || ||| |||| ||| | ||||||||||| |||||||||
Sbjct 19672284 GAGTATCTGTTCAACGCGATCGAAACGCTGCCGTGCGTAAAGAAGAAGGCCGACTGGGCG 19672225
Query 42663 CTCAACTGGATCGAGAGTCCCGACG--CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720
|| ||||||||| || | || | |||| || || ||| | |||| || || | |
Sbjct 19672224 CTGAACTGGATCTCCAG-CAAGAAGGCCAAC-TTTGGGGAGCGTGTGGTTGCGTTCGCTG 19672167
Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGG 42780
| ||||||||||||||||| ||| ||| || ||||||||||||| ||| || |
Sbjct 19672166 CAGTCGAGGGCATCTTCTTTAGTGGCAGCTTTGCGGCCATCTTCTGGCTGAAGAAGCGCG 19672107
Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840
||||| || || || ||||||||||| || ||| | |||||||| |||||
Sbjct 19672106 GCCTAATGCCGGGGCTGACGTTCTCGAACGAGCTGATCTCGCGCGACGAGGGACTGCACT 19672047
Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGG 42900
| |||||||||||||| ||||| | | || ||| || || ||||||||||| |
Sbjct 19672046 GTGACTTTGCCTGCCTGATGTTC---CGGTATCTGGTGCAGAAACCGTCGAAGGAGCGCG 19671990
Query 42901 TCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGC 42960
| || |||||| || || || | ||||||| |||||||||| ||| || | ||||
Sbjct 19671989 TGACGGAGATCATCCGCGATGCGGTCGTGATCGAGCAGGAGTTCCTGACGAAGGCACTGC 19671930
Query 42961 CCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCG 43020
| || | || ||||||||||| ||| || |||| ||||||| ||| ||| || |
Sbjct 19671929 CGGTCGACATGCTCGGCATGAACTGCGAACTGATGTCGCAGTACATTGAGTTCGTGGCGG 19671870
Query 43021 A 43021
|
Sbjct 19671869 A 19671869
>seq14
Length=2944040
Score = 242 bits (268), Expect = 7e-59
Identities = 937/1444 (65%), Gaps = 66/1444 (5%)
Strand=Plus/Minus
Query 244074 CCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGA 244133
||| || ||| || ||| || ||||||||||| ||||| ||||| || || | |||||
Sbjct 113532 CCTTGATCAGATGATGGTTTACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGA 113473
Query 244134 GGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAG 244193
||| || ||| |||| ||| ||||||||||||| || || || || |
Sbjct 113472 CGTTCGACGTGTACGGTTCGAACGACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGCTG 113413
Query 244194 TCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGA 244253
| ||||| || | | |||||| ||| | | ||||||| | ||| | |||
Sbjct 113412 TTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATGCCGTGCTT-----TGC--AATCTTT 113360
Query 244254 GCTCGTTCCAGTCC-CACATGCCCGAGAGGTCC-TCGCGTTTGAGGCCCCACATGTCAAA 244311
|| ||| | || | || || | || ||| ||| ||| | ||||||||| |
Sbjct 113359 --TCCTTCAACGCCACCCAATTCC-ACAGATCCGTCG-GTTCCTTGTTCCACATGTCGTA 113304
Query 244312 CTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTG 244371
|||||| | |||||||| || || | || ||||| ||| ||| || || ||
Sbjct 113303 CTGCAGAATGCCCTTGCTTACCGGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGGC 113244
Query 244372 GGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTT 244431
||||| | ||||| | || || || | ||||||||||| || || || || ||
Sbjct 113243 GGCCAATTCGCAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTCAAATATTTGCTGATT 113184
Query 244432 CATGTCGCGGGCCTTGC-CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCA 244490
| | | || |||| | | | | || | |||||||| ||||| | |||||||
Sbjct 113183 AAGCTTCTGCGC-TTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCA 113125
Query 244491 GTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCA 244550
||||| || ||||||||||| || | ||| ||| |||| |||||| | ||||| ||||
Sbjct 113124 TACCCTGGACACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCA 113065
Query 244551 CGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGT 244610
| ||||| |||| |||| || | |||||| || ||||| || | || | |||| |
Sbjct 113064 CCGGGTAGTAGTTCACGTCAATGATCTTGTTAAGATTGCGTGTCACGATCTTGGCGACCT 113005
Query 244611 CGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACT 244670
| |||| || || ||||| |||| |||| | | | |||||||
Sbjct 113004 CCTTCAGCTTCTCGAAATCGTA--CGTA-----------CGATCGGG--CTGCACAAACA 112960
Query 244671 CGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGA 244730
||| | || | ||||| ||||| |||||||| || ||| | || | |
Sbjct 112959 TGTTCAACGCAATCGAGGCCAAATTGCATACGGCCACTTCGTCCTTCGACGAATATTCCA 112900
Query 244731 CAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGG 244790
| ||||| ||||| |||||| ||| ||||| ||||| | || || || ||| |||
Sbjct 112899 CTATCTCAGTGCAAAGGTTAGAGCATTTGATAGTGCCAATGTTTTGCTGGTTGCTTTTGC 112840
Query 244791 CGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA 244850
||||| || |||||||| |||||| | || | || || || | ||| | ||| ||
Sbjct 112839 GATTGCACGCATCCTTGTACAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGA 112780
Query 244851 -CGCTGTTCCAGAGGTCCCTAGCCTTGAC-CGTCCTGCGAGCCTTGCCCTCTGCCTCGTA 244908
||| ||| || || ||||| || | | | | | |||||| ||||||
Sbjct 112779 TCGC-AAACCACAGATCTTGCGCCTTCACTTGACGTATAAAGC-GACCCTCTTTCTCGTA 112722
Query 244909 GCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGAC 244966
| |||||||| ||||||||| |||||| ||| | || ||||| || ||
Sbjct 112721 TCCCGTGTACAGCTTCTCGAACTCTTCGCCCCATGAATCGGCCAGCCCGGGACAATCGTG 112662
Query 244967 GCCGGGCACATGAGACTCCAC-TCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGG 245025
| |||||||| | ||||||| | | || ||| || | || |||||| || || ||
Sbjct 112661 G--GGGCACATCAAACTCCACGTTTCATTCG-CCTCCACACGCTTCATGAACAGATCCGG 112605
Query 245026 GATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCT 245085
||||| || || | ||| | |||| | | ||| ||| ||| ||||| ||| |
Sbjct 112604 TATCCACAGAGCGTAGAACATATCCCGAGCACGAACCTCCTCCTTGCCGGTGTTTTTCTT 112545
Query 245086 CAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCC 245145
||| |||| ||| ||||| || || | ||||| || || | ||||| ||| | |||||
Sbjct 112544 CAGATCCAGAAACTCAAACACATCACCATGCCACGGTTCGAGGTAGATAGCAAACGCGCC 112485
Query 245146 GGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGT 245205
|| ||||| || || ||||| || || ||| | |||| | | || || |
Sbjct 112484 TGGGCGCTTATTACCGCCCTGATCAACGTACCTTGCCGTGTTGTTGTACACACGTAGCAT 112425
Query 245206 AGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAG 245265
|| || | ||||| || ||||| ||||| |||||| | ||||| | | |
Sbjct 112424 CGGTACCAGCCCGTTCGAAATACCGTTCGTGCCGGAGATGTACGTTCCCTTCGCAC---G 112368
Query 245266 GTTGCTGATGGACATGCCTAGTCCG------CCGGCGTGCTTGGAGATGAGGGCGCAGCT 245319
| ||| | || |||| | |||||| ||||| || ||||| | |||||
Sbjct 112367 GATGCAG-TGCACATTC--AGTCCGATACCACCGGCCGATTTCGAGATCAATGCGCATTG 112311
Query 245320 CTTGATGGTGTCTGCTATGCCCTCCATGCT---GTCCGACTTCATGTTGAGCAGAAAGCA 245376
||| | || || || || || ||||| |||||| |||| | |||||||||||
Sbjct 112310 CTTTAGAGTATCGTAGATACCTTCGATGCTATCGTCCGA---CATGGTCAGCAGAAAGCA 112254
Query 245377 GGAGGACAGCTGGG---GCT-TGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGG 245432
|| || ||||| | ||| || ||| || || |||| || || |||||||
Sbjct 112253 AGAAGAAAGCTGAGGACGCTGTGTGGCCGC-CG---CAAACATGGTCGGAGAAGCGTGGG 112198
Query 245433 TAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGT 245492
||||||| || ||| || | |||||||| || | || || |||| |||||||
Sbjct 112197 TAAAGTAACGCTCCGAAAGCAGATTGTACGTCTCGATCGCTGCCTCAATGTCCTCGCCGT 112138
Query 245493 GGAT 245496
||||
Sbjct 112137 GGAT 112134
Score = 242 bits (268), Expect = 7e-59
Identities = 939/1445 (65%), Gaps = 68/1445 (5%)
Strand=Plus/Minus
Query 244074 CCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGA 244133
||| || ||| || ||| || ||||||||||| ||||| ||||| || || | |||||
Sbjct 128243 CCTTGATCAGATGATGGTTTACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGA 128184
Query 244134 GGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAG 244193
||| || ||| |||| ||| ||||||||||||| || || || || |
Sbjct 128183 CGTTCGACGTGTACGGTTCGAACGACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGCTG 128124
Query 244194 TCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGA 244253
| ||||| || | | |||||| ||| | | ||||||| | ||| | |||
Sbjct 128123 TTGGCATCGGTGCTAGCAGCAGTGAGTTACGAATGCCGTGCTT-----TGC--AATCTTT 128071
Query 244254 GCTCGTTCCAGTCC-CACATGCCCGAGAGGTCC-TCGCGTTTGAGGCCCCACATGTCAAA 244311
|| ||| | || | || || | || ||| ||| ||| | ||||||||| |
Sbjct 128070 --TCCTTCAACGCCACCCAATTCC-ACAGATCCGTCG-GTTCCTTGTTCCACATGTCGTA 128015
Query 244312 CTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTG 244371
|||||| | |||||||| || || | || ||||| ||| ||| || || ||
Sbjct 128014 CTGCAGAATGCCCTTGCTTACCGGACAACCTTCGTACGTCTCGTACGGCCCATCCTTGGC 127955
Query 244372 GGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTT 244431
||||| | ||||| | || || || | ||||||||||| || || || || ||
Sbjct 127954 GGCCAATTCGCAGCTAGCTTCCAGCGCTCCATAGTAGATGGTTTCAAATATTTGCTGATT 127895
Query 244432 CATGTCGCGGGCCTTGC-CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCA 244490
| | | || |||| | | | | || | |||||||| ||||| | |||||||
Sbjct 127894 AAGCTTCTGCGC-TTGCTCACTCTCGTACGGAAAGCCCATCAAAATGAACGCATCGGCCA 127836
Query 244491 GTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCA 244550
||||| || ||||||||||| || | ||| ||| |||| |||||| | ||||| ||||
Sbjct 127835 TACCCTGGACACCGATGCCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCA 127776
Query 244551 CGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGT 244610
| ||||| |||| |||| || | |||||| || ||||| || | || | |||| |
Sbjct 127775 CCGGGTAGTAGTTCACGTCAATGATCTTGTTAAGATTGCGTGTCACGATCTTGGCGACCT 127716
Query 244611 CGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACT 244670
| |||| || || ||||| |||| |||| | | | |||||||
Sbjct 127715 CCTTCAGCTTCTCGAAATCGTA--CGTA-----------CGATCGGG--CTGCACAAACA 127671
Query 244671 CGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGA 244730
||| | || | ||||| ||||| |||||||| || ||| | || | |
Sbjct 127670 TGTTCAACGCAATCGAGGCCAAATTGCATACGGCCACTTCGTCCTTCGACGAATATTCCA 127611
Query 244731 CAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGG 244790
| ||||| ||||| |||||| ||| ||||| ||||| | || || || ||| |||
Sbjct 127610 CTATCTCAGTGCAAAGGTTAGAGCATTTGATAGTGCCAATGTTTTGCTGGTTGCTTTTGC 127551
Query 244791 CGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA 244850
||||| || |||||||| |||||| | || | || || || | ||| | ||| ||
Sbjct 127550 GATTGCACGCATCCTTGTACAGCATGTACGGTACGCCCGTTTCCACCTGTGACTCGATGA 127491
Query 244851 -CGCTGTTCCAGAGGTCCCTAGCCTTGAC-CGTCCTGCGAGCCTTGCCCTCTGCCTCGTA 244908
||| ||| || || ||||| || | | | | | |||||| ||||||
Sbjct 127490 TCGC-AAACCACAGATCTTGCGCCTTCACTTGACGTATAAAGC-GACCCTCTTTCTCGTA 127433
Query 244909 GCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGAC 244966
| |||||||| ||||||||| |||||| ||| | || ||||| || ||
Sbjct 127432 TCCCGTGTACAGCTTCTCGAACTCTTCGCCCCATGAATCGGCCAGCCCGGGACAATCGTG 127373
Query 244967 GCCGGGCACATGAGACTCCAC-TCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGG 245025
| |||||||| | ||||||| | | || ||| || | || |||||| || || ||
Sbjct 127372 G--GGGCACATCAAACTCCACGTTTCATTCG-CCTCCACACGCTTCATGAACAGATCCGG 127316
Query 245026 GATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCT 245085
||||| || || | ||| | |||| | | ||| ||| ||| ||||| ||| |
Sbjct 127315 TATCCACAGAGCGTAGAACATATCCCGAGCACGAACCTCCTCCTTGCCGGTGTTTTTCTT 127256
Query 245086 CAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCC 245145
||| |||| ||| ||||| || || | ||||| || || | ||||| ||| | |||||
Sbjct 127255 CAGATCCAGAAACTCAAACACATCACCATGCCACGGTTCGAGGTAGATAGCAAACGCGCC 127196
Query 245146 GGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGT 245205
|| ||||| || || ||||| || || ||| | |||| | | || || |
Sbjct 127195 TGGGCGCTTATTACCGCCCTGATCAACGTACCTTGCCGTGTTGTTGTACACACGTAGCAT 127136
Query 245206 AGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAG 245265
|| || | ||||| || ||||| ||||| |||||| | ||||| | | |
Sbjct 127135 CGGTACCAGCCCGTTCGAAATACCGTTCGTGCCGGAGATGTACGTTCCCTTCGCAC---G 127079
Query 245266 GTTGCTGATGGACATGCCTAGTCCG------CCGGCGTGCTTGGAGATGAGGGCGCAGCT 245319
| ||| | || |||| | |||||| ||||| || ||||| | |||||
Sbjct 127078 GATGCAG-TGCACATTC--AGTCCGATACCACCGGCCGATTTCGAGATCAATGCGCATTG 127022
Query 245320 CTTGATGGTGTCTGCTATGCCCTCCATGCT---GTCCGACTTCATGTTGAGCAGAAAGCA 245376
||| | || || || || || ||||| |||||| |||| | |||||||||||
Sbjct 127021 CTTTAGAGTATCGTAGATACCTTCGATGCTATCGTCCGA---CATGGTCAGCAGAAAGCA 126965
Query 245377 GGAGGACAGCTGGG---GCT-TGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGG 245432
|| || ||||| | ||| || ||| || || |||| || || |||||||
Sbjct 126964 AGAAGAAAGCTGAGGACGCTGTGTGGCCGC-CG---CAAACATGGTCGGAGAAGCGTGGG 126909
Query 245433 TAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCG 245491
||||||| | |||| || || | |||||||| || | || || |||| ||||||
Sbjct 126908 TAAAGTAAC-GCTCTGAAAGCAGATTGTACGTCTCGATCGCTGCCTCAATGTCCTCGCCG 126850
Query 245492 TGGAT 245496
|||||
Sbjct 126849 TGGAT 126845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944335540685600
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