Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq5 136 3e-27
seq4 87.8 1e-12
seq9 86.0 5e-12
>seq5
Length=12895223
Score = 136 bits (150), Expect = 3e-27
Identities = 208/294 (71%), Gaps = 2/294 (1%)
Strand=Plus/Plus
Query 37815 GAAAACGCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAG 37874
|||| ||| |||| |||||| | ||||||||||||| || | ||||| ||| |||
Sbjct 6100709 GAAACTGCCCACACCCACGATGACCTGTGGAACGCGGCCCAGCTGCAGCTGGTGAAGGAG 6100768
Query 37875 GGTAAGATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGAT 37934
| |||||||| || | |||||||||||||| |||||||| | || ||| | ||
Sbjct 6100769 GCCAAGATGCACGGGTTTCTGCGCATGTATTGGGCGAAGAAAATACTAGAGTGGAC-GAA 6100827
Query 37935 GATGCTC-AGACCGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGG 37993
| || | || |||||| | ||||| |||||||| ||| |||||| |||| ||
Sbjct 6100828 AACGCCCGAGGAAGCGCTCGAAACGGCCATCTATCTCAACGATCGCTACAGCCTGGATGG 6100887
Query 37994 GCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGCTACACGATAGAGC 38053
||| ||||| || || |||||||| || ||||||| || ||| | || ||| |
Sbjct 6100888 GCGCGATCCGAATGGATACGTCGGGTGCATGTGGTCGATCGCCGGCATCCATGATCAGGG 6100947
Query 38054 CTGGCGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107
||| ||| |||| ||||| ||||| |||||||||||| |||| ||
Sbjct 6100948 ATGGAAGGAGCGGGAAATTTTTGGCAAAATTCGCTACATGAACTACGACGGCTG 6101001
>seq4
Length=15719670
Score = 87.8 bits (96), Expect = 1e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| || |||||||||||||| || ||||||||| || |||||||| |
Sbjct 4750555 ACCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGA 4750614
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
|| || | || |||| ||||||||||| || || || |||||||||||| |||
Sbjct 4750615 CAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGG 4750674
Query 34020 CACGCTCTCTTTGTCC 34035
| | ||| ||||||
Sbjct 4750675 GATACCCTCCTTGTCC 4750690
>seq9
Length=6651167
Score = 86.0 bits (94), Expect = 5e-12
Identities = 102/136 (75%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
||||||| ||| || || |||| || | || ||||||||| |||||||| || | |
Sbjct 534984 CCTCCTCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 535043
Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
| | || || |||| |||| ||||||||||| || ||||| ||||||||||| |||
Sbjct 535044 AGAGTG-CGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGG 535102
Query 34020 CACGCTCTCTTTGTCC 34035
| | ||||||||||
Sbjct 535103 GATTCCCTCTTTGTCC 535118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397060899848620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |