Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2 123 5e-23 >seq2 Length=22738934 Score = 123 bits (136), Expect = 5e-23 Identities = 258/382 (68%), Gaps = 2/382 (1%) Strand=Plus/Minus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 ||||||||| |||| || | ||||| || ||| |||| || |||| ||||| || Sbjct 20260899 CCAAGCGTCCACGTCCGAACTCTATGGCAAGGTGGTCGAAACGCCGCAGAACGAAAAAAC 20260840 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACG-GTGTTGCAAAGTTGTACGCTTATTGGATCTGTA 68523 ||| || ||||| ||| || |||| |||| || || |||||| || ||||| | Sbjct 20260839 TCCATTCTATCCGCGATCGCCGTACGCGTGT-GCGAAAATGTACGGCTACTGGATAGTGA 20260781 Query 68524 AAAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGA 68583 ||||| || ||| |||| ||||||| || |||||| ||| || || |||||| Sbjct 20260780 TCAATTATCGCGAGGCGTACAACATGTTTGCTTGCAACGGTATTCTCTTTAACCACGAGT 20260721 Query 68584 GTCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTT 68643 ||| |||| | | || ||||| ||||||||||| ||| ||||| |||| Sbjct 20260720 CGCCCCGGCGAGGTGAGAACTTTGTGACGCGTAAAATCACTCGCTCGGTGGCGAAGATTT 20260661 Query 68644 TCAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGAT 68703 || | | ||| | | ||||||||| | ||| | || | || ||||| Sbjct 20260660 CGCTCGGCCAGCAGGAGTGCGTCGAGCTCGGTAATCTCGATTCGAAGCGTGACTGGGGCC 20260601 Query 68704 ATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACT 68763 | || || || ||||| |||||||||||||||||| |||| || | ||||| || | Sbjct 20260600 ACGCAAAAGACTACGTCGAAGCAATGTGGTTGATGATGCAGCAGAAGCAGCCGGAAGATT 20260541 Query 68764 ATGTGATTGCAACAGGGAAAAC 68785 || ||||| || || |||| Sbjct 20260540 TCGTCATTGCGACGGGCGAAAC 20260519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875619498500