Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 5e-23
>seq2
Length=22738934
Score = 123 bits (136), Expect = 5e-23
Identities = 258/382 (68%), Gaps = 2/382 (1%)
Strand=Plus/Minus
Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464
||||||||| |||| || | ||||| || ||| |||| || |||| ||||| ||
Sbjct 20260899 CCAAGCGTCCACGTCCGAACTCTATGGCAAGGTGGTCGAAACGCCGCAGAACGAAAAAAC 20260840
Query 68465 TCCGTTTTATCCTCGAAGCCCTTACG-GTGTTGCAAAGTTGTACGCTTATTGGATCTGTA 68523
||| || ||||| ||| || |||| |||| || || |||||| || ||||| |
Sbjct 20260839 TCCATTCTATCCGCGATCGCCGTACGCGTGT-GCGAAAATGTACGGCTACTGGATAGTGA 20260781
Query 68524 AAAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGA 68583
||||| || ||| |||| ||||||| || |||||| ||| || || ||||||
Sbjct 20260780 TCAATTATCGCGAGGCGTACAACATGTTTGCTTGCAACGGTATTCTCTTTAACCACGAGT 20260721
Query 68584 GTCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTT 68643
||| |||| | | || ||||| ||||||||||| ||| ||||| ||||
Sbjct 20260720 CGCCCCGGCGAGGTGAGAACTTTGTGACGCGTAAAATCACTCGCTCGGTGGCGAAGATTT 20260661
Query 68644 TCAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGAT 68703
|| | | ||| | | ||||||||| | ||| | || | || |||||
Sbjct 20260660 CGCTCGGCCAGCAGGAGTGCGTCGAGCTCGGTAATCTCGATTCGAAGCGTGACTGGGGCC 20260601
Query 68704 ATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACT 68763
| || || || ||||| |||||||||||||||||| |||| || | ||||| || |
Sbjct 20260600 ACGCAAAAGACTACGTCGAAGCAATGTGGTTGATGATGCAGCAGAAGCAGCCGGAAGATT 20260541
Query 68764 ATGTGATTGCAACAGGGAAAAC 68785
|| ||||| || || ||||
Sbjct 20260540 TCGTCATTGCGACGGGCGAAAC 20260519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102875619498500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |