Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq14 140 3e-28 >seq14 Length=2944040 Score = 140 bits (154), Expect = 3e-28 Identities = 1042/1668 (62%), Gaps = 59/1668 (4%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| |||| || | || |||||||||||| ||||| | | || || | || | | Sbjct 126740 TACAATTATTTCGGTTTTAAAACTCTGGAGCGATCGTATTTGTTGAAAATCAAGGGAAAG 126799 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| ||||||| || || ||||||| |||||||| || || |||||| | ||| Sbjct 126800 ATTGTCGAGAGACCGCAGCATATGTTGATGCGTGTCGCCATTGGCATCCACGGCGAGGAC 126859 Query 93838 AT-------GC---CGA-ATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATA 93886 || || ||| | || |||||||||| || || | || Sbjct 126860 ATTGAGGCAGCGATCGAGACGTACAATCTGCTTTCAGAG-----CGTTAC------TTTA 126908 Query 93887 CCATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTT 93946 || || | |||||| |||| |||| || | | || ||| | ||||| || | Sbjct 126909 CCCACGCTTCTCCGACCATGTTTGCGGCGGCCACACAGCGTCCTCAGCTTTCTTCTTGCT 126968 Query 93947 TCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTG 94006 | ||| |||| | || ||| |||| || || | ||| | || ||| | || | Sbjct 126969 TTCTGCTGACCATGTCGGACGATAGCATCGAAGGTATCTACGATACTCTAAAGCAATGCG 127028 Query 94007 CGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGG 94066 | ||||| |||| || || || ||||| | | ||| ||| | | ||||| | || Sbjct 127029 CATTGATCTCGAAATCGGCCGGTGGTATCGGACTGAATGTGCACTGCATCCGTGCGAAGG 127088 Query 94067 GTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 | | |||||| ||| || || || | || ||||| || || || ||||| || || | Sbjct 127089 GAACGTACATCTCCGGCACGAACGGTATTTCGAACGGGCTGGTACCGATGCTACGTGTGT 127148 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 ||||||| |||| | ||||| || ||||| ||| | | | || | || || Sbjct 127149 ACAACAACACGGCAAGGTACGTTGATCAGGGCGGTAATAAGCGCCCAGGCGCGTTTGCTA 127208 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 |||| ||||| || ||||| | || ||| | || | || ||| || ||| || Sbjct 127209 TCTACCTCGAACCGTGGCATGGTGATGTGTTTGAGTTTCTGGATCTGAAGAAAAACACCG 127268 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 |||| || || | || | || | ||||||||||| ||| | || || || || | Sbjct 127269 GCAAGGAGGAGGTTCGTGCTCGGGATATGTTCTACGCTCTGTGGATACCGGATCTGTTCA 127328 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 |||| || || ||| || | |||||| | | || ||| | || |||||||| | Sbjct 127329 TGAAGCGTGTGGAGGCGAATGAAACGTGGAGTTTGATGTGCCCCCACGATTGTCCCGGGC 127388 Query 94367 TGTCCGACGTTTGTGGATCG--CGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG 94424 || |||| || ||| || || || | |||| | | ||||| |||| Sbjct 127389 TGGCCGA--TTCATGGGGCGAAGAGTTCGAGAAGCTGTACACGGGATACGAGAAAGAGGG 127446 Query 94425 CAAGGCCAGGAAGGTTA--TGGATGCTAGGAAG--CTGTGGGATCAGATCGTGGACGTAC 94480 || | || | || | || | ||| |||||| | |||| | || || Sbjct 127447 --TCGCTTTATACGTCAAGTGAAGGC--GCAAGATCTGTGGTTTGCGATCATCGAGTCAC 127502 Query 94481 AGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACC 94540 ||||||| ||||| || ||||| ||| |||||| | ||| ||| ||||| Sbjct 127503 AGGTGGAAACGGGCGTACCGTACATGCTGTACAAGGATGCGTGCAATCGCAAAAGCAACC 127562 Query 94541 AGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTT 94600 |||| || | || ||||| |||| || || ||||| ||||| || || ||| | | Sbjct 127563 AGCAAAACATTGGCACTATCAAATGCTCTAACCTTTGCACTGAGATAGTGGAATATTCGT 127622 Query 94601 CTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAG 94660 | |||||| | || || || || ||| ||| || || || || |||| || Sbjct 127623 CGAAGGACGAAGTGGCCGTATGCAATTTGGCCTCGATTGCGTTGAACATGTTTGTGC-AG 127681 Query 94661 ATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGA 94720 | || | | ||| |||| | ||| |||| | | |||| | || Sbjct 127682 -------CCCG----ATCGTACGTACGATTTCGAGAAGCTGAAGGAGGTCGC---CAAGA 127727 Query 94721 TGGT--CTTG-AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGG 94777 | || | | || || |||| | | || ||| ||||| |||||| || ||||| ||| Sbjct 127728 TCGTGACACGCAATCTTAACAAGATCATTGACGTGAACTACTACCCGGTGCCGGAAGCGA 127787 Query 94778 AGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGC 94837 || ||| ||| || || || || ||||||||||| ||||||||| | || || ||| Sbjct 127788 AGCGCTCGAACATGCGCCACCGTCCGATCGGCATCGGTGTCCAGGGTATGGCCGATGCGT 127847 Query 94838 TGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATAT 94897 | | ||||| | | || ||||| || | ||| | | ||| | | |||| Sbjct 127848 TCATTTTGATGGGCTTTCCGTACGAGAGTGAGCAAGCGCAGAAGCTTAATCAGCAAATAT 127907 Query 94898 TCGAAAGCATTTATTACGGGGC-CATGAAACAATCCGTCCACTTGGCCAGATCGGACGGC 94956 | |||| ||| || || || || | ||| | | | | | | |||||| | | | Sbjct 127908 TTGAAACCATCTACTATGGAGCGCTGGAAGCTAGCTG-CGAATTGGCC---GCCAAGGAT 127963 Query 94957 GGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTC 95016 ||||| |||| ||| | || | || | |||||||| | |||| |||| | Sbjct 127964 GGGCCGTACGAGACGTACGAAGGTTGTCCGGTAAGCAAGGGCATTCTGCAGTACGACATG 128023 Query 95017 TGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAA 95076 ||| | | || ||| ||||| | |||| || | | | || || Sbjct 128024 TGGAACAAGGAACCGACGGATCTGTGGAATTGGGTGGCGTTGAAGGAAAAGATTGCAAAG 128083 Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 ||||| | ||| | ||||| | || || ||||| || || || || || || || Sbjct 128084 CACGGCATTCGTAACTCACTGCTGCTAGCACCGATGCCAACAGCTTCGACTGCTCAAATA 128143 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 || |||||||| |||||||||||||| | ||| || ||||| |||||| | || ||||| Sbjct 128144 CTGGGCAACAATGAGTCGTTCGAACCGTACACGTCGAACGTCTACAACCGACGAGTGCTT 128203 Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTG 95256 | || || || | || | ||| | || || | ||||||||| | | ||| || Sbjct 128204 TCGGGCGAGTTTCAGGTTGTAAACCATCATCTGATCAAGGACCTGACCACGCACGGTCTG 128263 Query 95257 TGGGGTGACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACATCCC 95315 |||| || | | || ||| | || || | |||||| || ||||||| || Sbjct 128264 TGGGACGATGAAATGAAAAACACCATTCT-GGCACACAACGGATCGATCCAGAAAATAGA 128322 Query 95316 GCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363 | ||||||| ||||| | | || ||||| || || |||||||| Sbjct 128323 GAAAATACCAAAGGACGTGCGCGATCTGTACAAAACGGTTTGGGAGAT 128370 Score = 131 bits (144), Expect = 2e-25 Identities = 1040/1668 (62%), Gaps = 59/1668 (4%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| |||| || | || ||||| |||||| ||||| | | ||||| | || | | Sbjct 112029 TACAATTATTTCGGTTTTAAAACCCTGGAGCGATCGTATTTGTTGAAGATCAAGGGAAAG 112088 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| ||||||| || || ||||||| ||||| || || || |||||| | ||| Sbjct 112089 ATTGTCGAGAGACCGCAACATATGTTGATGCGTGTCGCTATTGGCATCCACGGCGAGGAC 112148 Query 93838 AT-------GC---CGA-ATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATA 93886 || || ||| | || |||||| ||| || || | || Sbjct 112149 ATTGAGGCAGCGATCGAGACGTACAATCTGCTTTCGGAG-----CGTTAC------TTTA 112197 Query 93887 CCATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTT 93946 || || | |||||| |||| |||| || | | || ||| | ||||| || | Sbjct 112198 CCCACGCTTCTCCGACCATGTTTGCGGCGGCCACACAGCGTCCTCAGCTTTCTTCTTGCT 112257 Query 93947 TCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTG 94006 | ||| |||| | || ||| |||| || || | ||| | || ||| | || | Sbjct 112258 TTCTGCTGACCATGTCGGACGATAGCATCGAAGGTATCTACGATACTCTAAAGCAATGCG 112317 Query 94007 CGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGG 94066 | ||||| |||| || || || ||||| | | ||| ||| | | ||||| | || Sbjct 112318 CATTGATCTCGAAATCGGCCGGTGGTATCGGACTGAATGTGCACTGCATCCGTGCGAAGG 112377 Query 94067 GTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 | | |||||| ||| || || || | || ||||| || || || ||||| || || | Sbjct 112378 GAACGTACATCTCCGGCACGAACGGTATTTCGAACGGGCTGGTACCGATGCTACGTGTGT 112437 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 ||||||| |||| | ||||| || ||||| ||| | | | || | || || Sbjct 112438 ACAACAACACGGCAAGGTACGTTGATCAGGGCGGTAATAAGCGCCCAGGCGCGTTTGCTA 112497 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 |||| ||||| || ||||| | || ||| | || | || ||| || ||| || Sbjct 112498 TCTACCTCGAACCGTGGCATGGTGATGTGTTTGAGTTTCTGGATCTGAAGAAAAACACCG 112557 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 |||| || || | || | || | ||||||||||| ||| | || || || || | Sbjct 112558 GCAAGGAGGAGGTTCGTGCTCGGGATATGTTCTACGCTCTGTGGATACCGGATCTGTTCA 112617 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 |||| || || ||| || | |||||| | | || ||| | || |||||||| | Sbjct 112618 TGAAGCGTGTGGAGGCGAATGAAACGTGGAGTTTGATGTGCCCCCACGATTGTCCCGGGC 112677 Query 94367 TGTCCGACGTTTGTGGATCG--CGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG 94424 || |||| || ||| || || || | |||| | | ||||| |||| Sbjct 112678 TGGCCGA--TTCATGGGGCGAAGAGTTCGAGAAGCTGTACACGGGATACGAGAAAGAGGG 112735 Query 94425 CAAGGCCAGGAAGGTTA--TGGATGCTAGGAAG--CTGTGGGATCAGATCGTGGACGTAC 94480 || | || | || | || | ||| |||||| | |||| | || || Sbjct 112736 --TCGCTTTATACGTCAAGTGAAGGC--GCAAGATCTGTGGTTTGCGATCATCGAGTCAC 112791 Query 94481 AGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACC 94540 ||||||| ||||| || ||||| ||| |||||| | ||| ||| ||||| Sbjct 112792 AGGTGGAAACGGGCGTACCGTACATGCTGTACAAGGATGCGTGCAATCGCAAAAGCAACC 112851 Query 94541 AGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTT 94600 |||| || | || ||||| |||| || || ||||| ||||| || || ||| | | Sbjct 112852 AGCAAAACATTGGCACTATCAAATGCTCTAACCTTTGCACTGAGATAGTGGAATATTCGT 112911 Query 94601 CTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAG 94660 | |||||| | || || || || ||| ||| || || || || |||| || Sbjct 112912 CGAAGGACGAAGTGGCCGTATGCAATTTGGCCTCGATTGCGTTGAACATGTTTGTGC-AG 112970 Query 94661 ATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGA 94720 | || | | ||| |||| | ||| |||| | | |||| | || Sbjct 112971 -------CCCG----ATCGTACGTACGATTTCGAGAAGCTGAAGGAGGTCGC---CAAGA 113016 Query 94721 TGGT--CTTG-AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGG 94777 | || | | || || |||| | | || ||| ||||| |||||| || ||||| ||| Sbjct 113017 TCGTGACACGCAATCTTAACAAGATCATTGACGTGAACTACTACCCGGTGCCGGAAGCGA 113076 Query 94778 AGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGC 94837 || ||| ||| || || || || ||||||||||| ||||||||| | || || ||| Sbjct 113077 AGCGCTCGAACATGCGCCACCGTCCGATCGGCATCGGTGTCCAGGGTATGGCCGATGCGT 113136 Query 94838 TGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATAT 94897 | | ||||| | | || ||||| || | ||| | | ||| | | |||| Sbjct 113137 TCATTTTGATGGGCTTTCCGTACGAGAGTGAGCAAGCGCAGAAGCTTAATCAGCAAATAT 113196 Query 94898 TCGAAAGCATTTATTACGGGGC-CATGAAACAATCCGTCCACTTGGCCAGATCGGACGGC 94956 | |||| ||| || || || || | ||| | | | | | | |||||| | | | Sbjct 113197 TTGAAACCATCTACTATGGAGCGCTGGAAGCTAGCTG-CGAATTGGCC---GCCAAGGAT 113252 Query 94957 GGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTC 95016 ||||| |||| ||| | || | || | |||||||| | |||| |||| | Sbjct 113253 GGGCCGTACGAGACGTACGAAGGTTGTCCGGTAAGCAAGGGCATTCTGCAGTACGACATG 113312 Query 95017 TGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAA 95076 ||| | | || ||| ||||| | |||| || | | | || || Sbjct 113313 TGGAACAAGGAACCGACGGATCTGTGGAATTGGGTGGCGTTGAAGGAAAAGATTGCAAAG 113372 Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 ||||| | ||| | ||||| | || || ||||| || || || || || || || Sbjct 113373 CACGGCATTCGTAACTCACTGCTGCTAGCACCGATGCCAACAGCTTCGACTGCTCAAATA 113432 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 || |||||||| |||||||||||||| | ||| || ||||| |||||| | || ||||| Sbjct 113433 CTGGGCAACAATGAGTCGTTCGAACCGTACACGTCGAACGTCTACAACCGACGAGTGCTT 113492 Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTG 95256 | || || || | || | ||| | || || | ||||||||| | | ||| || Sbjct 113493 TCGGGCGAGTTTCAGGTTGTAAACCATCATCTGATCAAGGACCTGACCACGCACGGTCTG 113552 Query 95257 TGGGGTGACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACATCCC 95315 |||| || | | || ||| | || || | |||||| || ||||||| || Sbjct 113553 TGGGACGATGAAATGAAAAACACCATTCT-GGCACACAACGGATCGATCCAGAAAATAGA 113611 Query 95316 GCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363 | ||||||| ||||| | | || ||||| || || |||||||| Sbjct 113612 GAAAATACCAAAGGACGTGCGCGATCTGTACAAAACGGTTTGGGAGAT 113659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721282947600