Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 9e-15
seq7 89.7 4e-13
>seq1
Length=30017264
Score = 95.1 bits (104), Expect = 9e-15
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399
|| ||||||||||| |||||||| | ||| ||| ||||||| ||| || || |||||
Sbjct 24411553 GCTGGGTTCGGTGTTACGGCCGGTGCCCACCGGCTGTGGACACACCGGGCGTATAAGGCG 24411494
Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459
| ||| || || | |||| | |||| || || | || ||||||| | |
Sbjct 24411493 AAGCTGCCGCTCCGGATCATCCTCATGTGCTGCTACTGTCTGTCCGGCCAGAACAGCCTG 24411434
Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519
| ||||||| ||||||| | | || ||||||||||| || ||| || || ||
Sbjct 24411433 TTCGATTGGGTGCGCGATCACCGCATCCATCACAAGTACTCGGAGACGGACGCGGATCCG 24411374
Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGAT 108569
|||||| | ||| | || |||| | | ||||||| || ||||| ||||
Sbjct 24411373 CACAACTCGAACCGTGGCTTCTTCTACGCGCACGTCGGCTGGCTGCTGAT 24411324
Score = 93.3 bits (102), Expect = 3e-14
Identities = 217/322 (67%), Gaps = 4/322 (1%)
Strand=Plus/Minus
Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399
||||||||||| ||||| | || || || ||| ||||| ||| | ||||| ||
Sbjct 24417114 GCCGGGTTCGGCGTGACCGGTGGGGTGCACCGGCTGTGGTGCCATCGGTCGTACAAAGCG 24417055
Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459
| ||| || | | |||| | |||| |||| | || || |||||||| |||
Sbjct 24417054 AAACTACCGCTCCGCATCATCCTTATGTGCTGCTACTCGATAGCCGGCCAGAACACGATC 24416995
Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACG-ACGGCCGACCC 108518
| ||||| | || || | |||||||||||||||| || ||| |||| || ||
Sbjct 24416994 TACGACTGGGTCCGGGACCATCGCATTCACCACAAGTACTCGGAAACGGACGGT-GATCC 24416936
Query 108519 ACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGA 108578
||||||||| ||| |||| ||| || ||||||| || ||||| ||| | |||| |
Sbjct 24416935 ACACAACGCGAACCGGGGCTTCCTGTATGCGCACGTCGGCTGGCTGATGCTTCGCAAGCA 24416876
Query 108579 CCCCGACGTG-ATCTCGGCCGGTCGAAAAATGGACATGACGGACATATACTCCGATCCGG 108637
||| || ||| ||| | || || || || ||| | ||||| | ||||||||
Sbjct 24416875 CCCGGA-GTGCATCAAGAAGGGCCGGCTGATCGATATGTCCGACATCATCAGCGATCCGG 24416817
Query 108638 TGGTAGTGTGGCACACCAAGTA 108659
| ||| || ||| ||||||
Sbjct 24416816 TCGTACAGTTCCACCACAAGTA 24416795
Score = 86.0 bits (94), Expect = 5e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 108889 GGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTG 108948
||||| |||||||||||||||||||| |||||||| | ||||||||||| |||||| ||
Sbjct 24410864 GGCGAAGGATGGCACAACTACCACCATGTGTTCCCGTGGGACTACAAGGCGGCCGAGCTG 24410805
Query 108949 GGGAACGACT 108958
|| ||| |||
Sbjct 24410804 GGCAACTACT 24410795
Score = 82.4 bits (90), Expect = 6e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940
|||| | ||||| |||||||||||||||||||| |||||||| | ||||||||||| |
Sbjct 24414433 TGGCCATGGGCGAAGGATGGCACAACTACCACCATGTGTTCCCGTGGGACTACAAGGCGG 24414374
Query 108941 CCGAGTTGGGGAACGACT 108958
||||| | || ||| |||
Sbjct 24414373 CCGAGCTCGGCAACTACT 24414356
>seq7
Length=7675037
Score = 89.7 bits (98), Expect = 4e-13
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 108870 GGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGA 108929
|||||| |||| || ||||||| |||||||||||||| |||||||||||||| | ||
Sbjct 332863 GGTGGCTTCGTTCGCATTCGGCGAAGGATGGCACAACTATCACCACGTGTTCCCGTGGGA 332922
Query 108930 CTACAAGGCCGCCGAGTTGGGGAA 108953
||||||| | |||||| |||| ||
Sbjct 332923 CTACAAGACGGCCGAGCTGGGCAA 332946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381771357614640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |