Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq14 259 4e-64
seq4 87.8 2e-12
>seq14
Length=2944040
Score = 259 bits (286), Expect = 4e-64
Identities = 949/1473 (64%), Gaps = 30/1473 (2%)
Strand=Plus/Plus
Query 122877 TATTTGaaaaaaaTCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTC 122936
|||||| || ||| ||| |||| | | ||| | ||||||||| | ||||| |||
Sbjct 112065 TATTTGTTGAAGATCAAGGGAAAGATTGTCGAGAGACCGCAACATATGTTGATGCGTGTC 112124
Query 122937 GCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCT 122996
||||| ||| | ||||| ||||| || |||| ||| || ||| || || | ||
Sbjct 112125 GCTATTGGCATCCACGGCGAGGACATTGAGGCAGCGATCGAGACGTACAATCTGCTTTCG 112184
Query 122997 CAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAG 123056
| | || || ||||| ||| || |||| || || | ||| || ||||||
Sbjct 112185 GAGCGTTACTTTACCCACGCTTCTCCGACCATGTTTGCGGCGGCCACACAGCGTCCTCAG 112244
Query 123057 TTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACT 123116
| ||||| || ||| |||| ||| || || || |||||| |||||||| || |||
Sbjct 112245 CTTTCTTCTTGCTTTCTGCTGACCATGTCGGACGATAGCATCGAAGGTATCTACGATACT 112304
Query 123117 TTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGAC 123176
| | ||||| ||||| || |||| | ||| || || || |||| |||||| |
Sbjct 112305 CTAAAGCAATGCGCATTGATCTCGAAATCGGCCGGTGGTATCGGACTGAATGTGCACTGC 112364
Query 123177 GTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCC 123236
| | | |||| |||| |||| |||| || | |||||| | | |
Sbjct 112365 ATCCGTGCGAAGGGAACGTACATCTCCGGCACGAACGGTATTTCGAACGGGCTGGTACCG 112424
Query 123237 ATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAAA---CGCAAA 123293
||||| || || ||||| ||| | | || |||| || |||||||| || ||| |
Sbjct 112425 ATGCTACGTGTGTACAACAACACGGCAAGGTACGTTGATCAGGGCGGTAATAAGCGCCCA 112484
Query 123294 GGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTA 123353
|||||| | || ||||| || ||||||||||| | |||||||| || ||| | || |
Sbjct 112485 GGCGCGTTTGCTATCTACCTCGAACCGTGGCATGGTGATGTGTTTGAGTTTCTGGATCTG 112544
Query 123354 AAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTA 123413
|| |||| || ||| || || || ||| |||| |||||| | ||| ||
Sbjct 112545 AAGAAAAACACCGGCAAGGAGGAGGTTCGTGCTCGGGATATGTTCTACGCTCTGTGGATA 112604
Query 123414 CCCGATTTGTTTATGCGACGCGTAAAAGACGACGG---CGTGTGGTCGCTCATGTGTCCC 123470
|| ||| |||| ||| || || | | ||| | |||| || | ||||| |||
Sbjct 112605 CCGGATCTGTTCATGAAGCGTGTGGAGG-CGAATGAAACGTGGAGTT--TGATGTGCCCC 112661
Query 123471 GATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAA 123530
| |||||||| || ||| | ||| | |||| || || ||||| || |
Sbjct 112662 CACGATTGTCCCGGGCTGGCCGATTCATGGGGCGAAGAGTTCGAGAAGCTGTACACGGGA 112721
Query 123531 TACGAGCGCGAAGGCAAACAGGTTA---GTCAGGTTCCGGCACGTGATTTGTTCAAATTT 123587
|||||| || || | ||| |||| || ||| | ||| ||| |||
Sbjct 112722 TACGAGAAAGAGGGT---CGCTTTATACGTCAAGTGAAGGCGCAAGATCTGTGG---TTT 112775
Query 123588 ---ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGC 123644
|| ||||| |||| || ||||| || ||||||||||| ||||| || || |||
Sbjct 112776 GCGATCATCGAGTCACAGGTGGAAACGGGCGTACCGTACATGCTGTACAAGGATGCGTGC 112835
Query 123645 AACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAA 123704
|| | |||| ||| ||| ||| | || || || ||||| ||| |||||| | ||
Sbjct 112836 AATCGCAAAAGCAACCAGCAAAACATTGGCACTATCAAATGCTCTAACCTTTGCACTGAG 112895
Query 123705 ATTATCGAATA--CAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCG 123762
|| | ||||| | ||| | || |||||||||| || |||||||| |||||| |||
Sbjct 112896 ATAGTGGAATATTCGTCGAAG--GACGAAGTGGCCGTATGCAATTTGGCCTCGATT-GCG 112952
Query 123763 TGAATCGT-TGCGTCGAAAACGG-CGCTTTTA--ATTTCCAAACGCTCAAACGCATAACA 123818
| | | | | || | || || || ||||| | | ||| || | |
Sbjct 112953 TTGAACATGTTTGTGCAGCCCGATCGTACGTACGATTTCGAGAAGCTGAAGGAGGTCGCC 113012
Query 123819 AAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAA 123878
|| | || | ||| | ||||| || || || || || | || || || ||||
Sbjct 113013 AAGATCGTGACACGCAATCTTAACAAGATCATTGACGTGAACTACTACCCGGTGCCGGAA 113072
Query 123879 GCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGAC 123938
||| || || || ||| | ||| |||| | || | || || |||||||
Sbjct 113073 GCGAAGCGCTCGAACATGCGCCACCGTCCGATCGGCATCGGTGTCCAGGGTATGGCCGAT 113132
Query 123939 GCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAA 123998
||||| | || || || | |||||||| || || |||| || ||||||| ||||
Sbjct 113133 GCGTTCATTTTGATGGGCTTTCCGTACGAGAGTGAGCAAGCGCAGAAGCTTAATCAGCAA 113192
Query 123999 ATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCAC 124058
||| ||||| || || || || || |||| || ||||||||| | || | |
Sbjct 113193 ATATTTGAAACCATCTACTATGGAGCGCTGGAAGCTAGCTGCGAATTGGCCGCCAAGGAT 113252
Query 124059 GGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATG 124118
|| ||||||| | |||| || | |||| ||| || ||| ||||||||||||||
Sbjct 113253 GGGCCGTACGAGACGTACGAAGGTTGTCCGGTAAGCAAGGGCATTCTGCAGTACGACATG 113312
Query 124119 TGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACG 124178
||||| |||||| || ||||| | ||| | || || || || | | |
Sbjct 113313 TGGAACAAGGAACCGACGGATCTGTGGAATTGGGTGGCGTTGAAGGAAAAGATTGCAAAG 113372
Query 124179 CACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATT 124238
||||| | |||||||| ||| || | || ||||| || || | |||||||||||
Sbjct 113373 CACGGCATTCGTAACTCACTGCTGCTAGCACCGATGCCAACAGCTTCGACTGCTCAAATA 113432
Query 124239 TTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTA 124298
| || ||||| || || ||||| |||| ||| || | ||| ||||||||| |
Sbjct 113433 CTGGGCAACAATGAGTCGTTCGAACCGTACACGTCGAACGTCTACAACCGACGAGTGCTT 113492
Query 124299 GCCGGCGATTTTCAAGTGATAAATCATCATTTG 124331
| ||||| ||||| || |||| |||||| ||
Sbjct 113493 TCGGGCGAGTTTCAGGTTGTAAACCATCATCTG 113525
Score = 253 bits (280), Expect = 2e-62
Identities = 948/1473 (64%), Gaps = 30/1473 (2%)
Strand=Plus/Plus
Query 122877 TATTTGaaaaaaaTCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTC 122936
|||||| |||||| ||| |||| | | ||| | || |||||| | ||||| |||
Sbjct 126776 TATTTGTTGAAAATCAAGGGAAAGATTGTCGAGAGACCGCAGCATATGTTGATGCGTGTC 126835
Query 122937 GCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCT 122996
|| || ||| | ||||| ||||| || |||| ||| || ||| || || | ||
Sbjct 126836 GCCATTGGCATCCACGGCGAGGACATTGAGGCAGCGATCGAGACGTACAATCTGCTTTCA 126895
Query 122997 CAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAG 123056
| | || || ||||| ||| || |||| || || | ||| || ||||||
Sbjct 126896 GAGCGTTACTTTACCCACGCTTCTCCGACCATGTTTGCGGCGGCCACACAGCGTCCTCAG 126955
Query 123057 TTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACT 123116
| ||||| || ||| |||| ||| || || || |||||| |||||||| || |||
Sbjct 126956 CTTTCTTCTTGCTTTCTGCTGACCATGTCGGACGATAGCATCGAAGGTATCTACGATACT 127015
Query 123117 TTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGAC 123176
| | ||||| ||||| || |||| | ||| || || || |||| |||||| |
Sbjct 127016 CTAAAGCAATGCGCATTGATCTCGAAATCGGCCGGTGGTATCGGACTGAATGTGCACTGC 127075
Query 123177 GTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCC 123236
| | | |||| |||| |||| |||| || | |||||| | | |
Sbjct 127076 ATCCGTGCGAAGGGAACGTACATCTCCGGCACGAACGGTATTTCGAACGGGCTGGTACCG 127135
Query 123237 ATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAAA---CGCAAA 123293
||||| || || ||||| ||| | | || |||| || |||||||| || ||| |
Sbjct 127136 ATGCTACGTGTGTACAACAACACGGCAAGGTACGTTGATCAGGGCGGTAATAAGCGCCCA 127195
Query 123294 GGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTA 123353
|||||| | || ||||| || ||||||||||| | |||||||| || ||| | || |
Sbjct 127196 GGCGCGTTTGCTATCTACCTCGAACCGTGGCATGGTGATGTGTTTGAGTTTCTGGATCTG 127255
Query 123354 AAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTA 123413
|| |||| || ||| || || || ||| |||| |||||| | ||| ||
Sbjct 127256 AAGAAAAACACCGGCAAGGAGGAGGTTCGTGCTCGGGATATGTTCTACGCTCTGTGGATA 127315
Query 123414 CCCGATTTGTTTATGCGACGCGTAAAAGACGACGG---CGTGTGGTCGCTCATGTGTCCC 123470
|| ||| |||| ||| || || | | ||| | |||| || | ||||| |||
Sbjct 127316 CCGGATCTGTTCATGAAGCGTGTGGAGG-CGAATGAAACGTGGAGTT--TGATGTGCCCC 127372
Query 123471 GATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAA 123530
| |||||||| || ||| | ||| | |||| || || ||||| || |
Sbjct 127373 CACGATTGTCCCGGGCTGGCCGATTCATGGGGCGAAGAGTTCGAGAAGCTGTACACGGGA 127432
Query 123531 TACGAGCGCGAAGGCAAACAGGTTA---GTCAGGTTCCGGCACGTGATTTGTTCAAATTT 123587
|||||| || || | ||| |||| || ||| | ||| ||| |||
Sbjct 127433 TACGAGAAAGAGGGT---CGCTTTATACGTCAAGTGAAGGCGCAAGATCTGTGG---TTT 127486
Query 123588 ---ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGC 123644
|| ||||| |||| || ||||| || ||||||||||| ||||| || || |||
Sbjct 127487 GCGATCATCGAGTCACAGGTGGAAACGGGCGTACCGTACATGCTGTACAAGGATGCGTGC 127546
Query 123645 AACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAA 123704
|| | |||| ||| ||| ||| | || || || ||||| ||| |||||| | ||
Sbjct 127547 AATCGCAAAAGCAACCAGCAAAACATTGGCACTATCAAATGCTCTAACCTTTGCACTGAG 127606
Query 123705 ATTATCGAATA--CAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCG 123762
|| | ||||| | ||| | || |||||||||| || |||||||| |||||| |||
Sbjct 127607 ATAGTGGAATATTCGTCGAAG--GACGAAGTGGCCGTATGCAATTTGGCCTCGATT-GCG 127663
Query 123763 TGAATCGT-TGCGTCGAAAACGG-CGCTTTTA--ATTTCCAAACGCTCAAACGCATAACA 123818
| | | | | || | || || || ||||| | | ||| || | |
Sbjct 127664 TTGAACATGTTTGTGCAGCCCGATCGTACGTACGATTTCGAGAAGCTGAAGGAGGTCGCC 127723
Query 123819 AAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAA 123878
|| | || | ||| | ||||| || || || || || | || || || ||||
Sbjct 127724 AAGATCGTGACACGCAATCTTAACAAGATCATTGACGTGAACTACTACCCGGTGCCGGAA 127783
Query 123879 GCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGAC 123938
||| || || || ||| | ||| |||| | || | || || |||||||
Sbjct 127784 GCGAAGCGCTCGAACATGCGCCACCGTCCGATCGGCATCGGTGTCCAGGGTATGGCCGAT 127843
Query 123939 GCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAA 123998
||||| | || || || | |||||||| || || |||| || ||||||| ||||
Sbjct 127844 GCGTTCATTTTGATGGGCTTTCCGTACGAGAGTGAGCAAGCGCAGAAGCTTAATCAGCAA 127903
Query 123999 ATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCAC 124058
||| ||||| || || || || || |||| || ||||||||| | || | |
Sbjct 127904 ATATTTGAAACCATCTACTATGGAGCGCTGGAAGCTAGCTGCGAATTGGCCGCCAAGGAT 127963
Query 124059 GGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATG 124118
|| ||||||| | |||| || | |||| ||| || ||| ||||||||||||||
Sbjct 127964 GGGCCGTACGAGACGTACGAAGGTTGTCCGGTAAGCAAGGGCATTCTGCAGTACGACATG 128023
Query 124119 TGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACG 124178
||||| |||||| || ||||| | ||| | || || || || | | |
Sbjct 128024 TGGAACAAGGAACCGACGGATCTGTGGAATTGGGTGGCGTTGAAGGAAAAGATTGCAAAG 128083
Query 124179 CACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATT 124238
||||| | |||||||| ||| || | || ||||| || || | |||||||||||
Sbjct 128084 CACGGCATTCGTAACTCACTGCTGCTAGCACCGATGCCAACAGCTTCGACTGCTCAAATA 128143
Query 124239 TTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTA 124298
| || ||||| || || ||||| |||| ||| || | ||| ||||||||| |
Sbjct 128144 CTGGGCAACAATGAGTCGTTCGAACCGTACACGTCGAACGTCTACAACCGACGAGTGCTT 128203
Query 124299 GCCGGCGATTTTCAAGTGATAAATCATCATTTG 124331
| ||||| ||||| || |||| |||||| ||
Sbjct 128204 TCGGGCGAGTTTCAGGTTGTAAACCATCATCTG 128236
>seq4
Length=15719670
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | ||| || || || || |||||||| ||||| || || || |
Sbjct 15451525 CCACCACGGAGTCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCC--G 15451468
Query 45174 ACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
|| | | | ||| |||| || || || ||| | |||| || ||||| ||||| |
Sbjct 15451467 ACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCCGGAG 15451408
Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGA 45291
| || ||||| || || || || || || | ||| | ||||| || | |||||
Sbjct 15451407 GGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGA 15451348
Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || ||||| | ||||||||||| || ||||| || ||||| |||||
Sbjct 15451347 CCTCAAGAGTGATGGTTTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 15451299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452001448487600
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