Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2 246 5e-60
seq14 181 2e-40
>seq2
Length=22738934
Score = 246 bits (272), Expect = 5e-60
Identities = 488/713 (68%), Gaps = 12/713 (2%)
Strand=Plus/Plus
Query 159745 CAGCAACCTGTCTGCCACAAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCA 159803
|||||||| || ||||| || || ||||| || | ||||| | || ||||| || || |
Sbjct 19671859 CAGCAACCGATCCGCCACGAACTCAATGTA-CTGCGACATCAGTTCGCAGTTCATGCCGA 19671917
Query 159804 GCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCA 159863
||| || || || || | || ||| ||||||| ||| ||| ||||||| ||| |
Sbjct 19671918 GCATGTCGACCGGCAGTGCCTTCGTCAGGAACTCCTGCTCGATCACGACCGCATCGCGGA 19671977
Query 159864 CAATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923
|||| || || || || | | ||| || || | | | | |||| ||||
Sbjct 19671978 TGATCTCCGTCACGCGCTCCTTCGACGGTTTCTGCACCA---GATACCGGAACATCAGGC 19672034
Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983
| |||||||| ||||||||||||||||| || ||||| | |||||| || | | || |
Sbjct 19672035 AGGCAAAGTCACAGTGCAGTCCCTCGTCGCGCGAGATCAGCTCGTTCGAGAACGTCAGCC 19672094
Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043
||||||| | || ||| || ||||| || ||||||||||| || ||||| ||||
Sbjct 19672095 CCGGCATTAGGCCGCGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCACTAAAGAAGA 19672154
Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG 160103
| ||||| || || || ||||| || | | ||| ||||| ||| || || |
Sbjct 19672155 TGCCCTCGACTGCAGCGAACGCAACCACACGCTCCCCAAAGTTGGCCTTCTTGCTGGAGA 19672214
Query 160104 TCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCG-CTCGACGGCGTTA 160162
|||| | ||||| || |||||||| | |||||||| ||| |||| |||||
Sbjct 19672215 TCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTTACGCACGGCA-GCGTTTCGATCGCGTTG 19672273
Query 160163 AACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATT 160222
|||| ||| |||||||| || || || | |||||| ||||||||||
Sbjct 19672274 AACAGATACTCCCGCTCCTTCGGGTCGCGTATGTACGTGTCGATCAGCAGCGAGTACATT 19672333
Query 160223 TCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC 160282
|| |||||| || || || || |||||||| |||||| | |||||| |
Sbjct 19672334 TCGCTGTGCACGTTCTCCATCGCAATCTGAAACCCGTAGAAGCAGCGGGCCTCCGTCACC 19672393
Query 160283 TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCA 160342
||||||||||| |||| | | ||||||| |||| || | ||||| | ||| ||
Sbjct 19672394 TGCACCTCCTGGCTGAAGCGCTCCACCAGATTCTCATTTACGATACCGTCCGAGGCGGCG 19672453
Query 160343 AAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTG-TTGAGTCTCTTTTCCCA 160401
||||| || | |||||| ||||||||||| | |||| ||| | ||||| | ||||||
Sbjct 19672454 AAGAAGGCAAGCACGTGCGAGATGAAATGACGCTCG-CTTGGTTTGAG---CGATTCCCA 19672509
Query 160402 GTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCT 160454
|| | ||| ||| | | || || ||||||||| | |||| || |||||
Sbjct 19672510 GTCTTTCATGTCCTTCGACAGGTCCACCTCTTCCACCGTCCAGAAGGAAGCCT 19672562
>seq14
Length=2944040
Score = 181 bits (200), Expect = 2e-40
Identities = 344/503 (68%), Gaps = 4/503 (1%)
Strand=Plus/Minus
Query 203829 GAACCTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGAT 203888
||| |||||| ||||| ||||||||||| || || || ||||| ||| | | | || ||
Sbjct 113874 GAAGCTTCGTTTTGTCGACCGTGAACTGGATCGCATTTACGGCCGGCTTCGTGCGCAAAT 113815
Query 203889 AGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGC 203948
|||||||||| ||||| | ||| ||| |||| |||| | ||| || || | ||||| |
Sbjct 113814 AGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTAAAAGTGGATCGAGGTTAGTTTAC 113755
Query 203949 TCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCC 204008
|||||| ||||||| ||| ||||| | || ||| ||||||||||| | | |
Sbjct 113754 CGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGACTGGTCGATGAACGCTCCAC 113695
Query 204009 GATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGT 204068
|||| || ||||| | ||| || || ||| |||||||| ||||| ||| ||| |
Sbjct 113694 GATCGGCCGCCATTTGGATGCACGTTTTAACCGATATCTCCCAAACCGTTTTGTACAGAT 113635
Query 204069 CTCTGGTGTGTTGAGGCACATCTTC-CCACGTCCT-GATCGAGCCGTTGTCGGCCATCAG 204126
| | || | || || ||| | | | || |||||| ||||||| |||| |
Sbjct 113634 CGCGCACGTCCTTTGG--TATTTTCTCTATTTTCTGGATCGATCCGTTGTGTGCCAGAAT 113577
Query 204127 TCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGG 204186
| | || | || || |||||| || | || |||| ||| | ||| || |
Sbjct 113576 GGTGTTTTTCATTTCATCGTCCCACAGACCGTGCGTGGTCAGGTCCTTGATCAGATGATG 113517
Query 204187 GTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGG 204246
||| | | |||||| || || || ||||| | |||| || | | ||| ||| | ||
Sbjct 113516 GTTTACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGACGTGTACGG 113457
Query 204247 TTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAG 204306
|||||||| ||| |||||||| | || ||||| || || || ||||| || || ||
Sbjct 113456 TTCGAACGACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGCTGTTGGCATCGGTGCTAG 113397
Query 204307 GAGCAGGGAGTTGCGCACACCGT 204329
||||| ||||| || | ||||
Sbjct 113396 CAGCAGTGAGTTACGAATGCCGT 113374
Score = 176 bits (194), Expect = 7e-39
Identities = 343/503 (68%), Gaps = 4/503 (1%)
Strand=Plus/Minus
Query 203829 GAACCTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGAT 203888
||| |||||| ||||| ||||||||||| || || || ||||| ||| | | | || ||
Sbjct 128585 GAAGCTTCGTTTTGTCGACCGTGAACTGGATCGCATTTACGGCCGGCTTCGTGCGCAAAT 128526
Query 203889 AGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGC 203948
|||||||||| ||||| | ||| ||| |||| ||| | ||| || || | ||||| |
Sbjct 128525 AGTACATGCCAGTCTTCAAACCCATCTTCCACGCGTGAAAGTGGATCGAGGTTAGTTTAC 128466
Query 203949 TCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCC 204008
|||||| ||||||| ||| ||||| | || ||| ||||||||||| | | |
Sbjct 128465 CGTAGTTGGGTTCGGCCACGTGTATGTTGAACGATTGGGACTGGTCGATGAACGCTCCAC 128406
Query 204009 GATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGT 204068
|||| || ||||| | ||| || || ||| |||||||| ||||| ||| ||| |
Sbjct 128405 GATCGGCCGCCATTTGGATGCACGTTTTAACCGATATCTCCCAAACCGTTTTGTACAGAT 128346
Query 204069 CTCTGGTGTGTTGAGGCACATCTTC-CCACGTCCT-GATCGAGCCGTTGTCGGCCATCAG 204126
| | || | || || ||| | | | || |||||| ||||||| |||| |
Sbjct 128345 CGCGCACGTCCTTTGG--TATTTTCTCTATTTTCTGGATCGATCCGTTGTGTGCCAGAAT 128288
Query 204127 TCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGG 204186
| | || | || || |||||| || | || |||| ||| | ||| || |
Sbjct 128287 GGTGTTTTTCATTTCATCGTCCCACAGACCGTGCGTGGTCAGGTCCTTGATCAGATGATG 128228
Query 204187 GTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGG 204246
||| | | |||||| || || || ||||| | |||| || | | ||| ||| | ||
Sbjct 128227 GTTTACAACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGACGTGTACGG 128168
Query 204247 TTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAG 204306
|||||||| ||| |||||||| | || ||||| || || || ||||| || || ||
Sbjct 128167 TTCGAACGACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGCTGTTGGCATCGGTGCTAG 128108
Query 204307 GAGCAGGGAGTTGCGCACACCGT 204329
||||| ||||| || | ||||
Sbjct 128107 CAGCAGTGAGTTACGAATGCCGT 128085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795152118773600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |