Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq9 156 5e-33
seq1 123 3e-23
seq4 122 1e-22
>seq9
Length=6651167
Score = 156 bits (172), Expect = 5e-33
Identities = 175/233 (75%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
||||||||| | ||| | |||| ||||| || |||||| ||||| ||||||||||
Sbjct 534982 TGCCTCCTCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGG 535041
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| |||||||| |||| || ||||||||||||||||| |||| |||||||| || | ||
Sbjct 535042 ACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCG 535101
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---T 46541
| | | ||| |||||| |||||| ||||| || | | ||| || |||| |
Sbjct 535102 GGATTCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTATC---CGATGGCT 535158
Query 46542 CCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
| || |||| |||||||| ||||| |||||||| || || ||||| ||||||
Sbjct 535159 CGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCATT 535211
Score = 143 bits (158), Expect = 3e-29
Identities = 147/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| |||||||| |||| || |||||||||||||||||
Sbjct 534616 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAA 534675
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||| || | ||| | | |||||||||| |||||| ||||| |
Sbjct 534676 GATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 534735
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | ||| || || || || |||| |||||||| ||||| |||||||| || ||
Sbjct 534736 CTCGATCGTATCCGACGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGCGTCTTCAC 534795
Query 46582 AAAGATTTGCAT 46593
|| || |||||
Sbjct 534796 GAAAATCTGCAT 534807
>seq1
Length=30017264
Score = 123 bits (136), Expect = 3e-23
Identities = 169/235 (72%), Gaps = 6/235 (3%)
Strand=Plus/Plus
Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425
|||||| | | ||| | |||||| || | || |||||| |||||||||||||| ||
Sbjct 15159549 GCCTCCACGCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGA 15159608
Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485
|| || || | || || |||||||| |||||||| |||| |||||||| || | ||
Sbjct 15159609 CAGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGG 15159668
Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TC 46542
| || ||||| ||| ||||| ||| | || | | ||||| |||| ||
Sbjct 15159669 GATGCCTTCCTTATCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTC---CGATGGCTC 15159725
Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
||| |||| ||||||||| || || ||||| || || || ||||||||||| |||
Sbjct 15159726 CACCTCCAGCGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAGATTTGCATGTTG 15159780
>seq4
Length=15719670
Score = 122 bits (134), Expect = 1e-22
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||||||||| | || |||||| ||||||||||| ||||| || ||||| | || ||
Sbjct 4750573 CACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGACAGCGTGCGGCCATCCTC 4750632
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||||||||||||||||| || | |||||||| || | ||| | | ||||||||||
Sbjct 4750633 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTG 4750692
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||| | || | | ||| || | || || || | || ||||| ||
Sbjct 4750693 GATCTTTGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTT 4750752
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600
||||| || ||||| || ||||| ||||| ||| ||
Sbjct 4750753 ACCCGTGAGGGTTTTGACGAAGATCTGCATCTTGAAC 4750789
Score = 111 bits (122), Expect = 2e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| |||||||| || |||||||| | || || |||||||||||||||||
Sbjct 15451489 TCCTTCTGGATGTTGTAGTCCGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAG 15451430
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| |||||||| || | || | | ||||||||| |||||| ||| | |
Sbjct 15451429 ATCAGACGCTGCTGATCCGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATTT 15451370
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | |||||| | || || || | |||||||||||||| || || ||||| ||
Sbjct 15451369 TCGATCGTGTCCGAGGGCTCGACCTCAAGAGTGATGGTTTTGCCGGTGAGTGTTTTCACG 15451310
Query 46583 AAGATTTGCATTTT 46596
|| || ||||| ||
Sbjct 15451309 AAAATCTGCATGTT 15451296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565236209701200
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