Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq7 102 6e-16 >seq7 Length=7675037 Score = 102 bits (112), Expect = 6e-16 Identities = 542/861 (63%), Gaps = 10/861 (1%) Strand=Plus/Minus Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910 |||| |||| |||||||| ||||| | ||||| | | || ||||| || || || | Sbjct 853203 AATCGGTTCCCTCGAACAACGAATCGATCTCAATGCTGGCCTGCGTCGACGAGGACAGCG 853144 Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT--TTGCTGATTGATT 517968 || || || |||||||| || || | || | || | || ||| | | || Sbjct 853143 TGCGCTTCGCGCGTTCACACGCCGTGCGCAGACGACGCAGCGCACGCTTGTTCGTGGA-- 853086 Query 517969 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 518028 |||||| | || | ||| | |||||| || | | | | | || ||||| || || Sbjct 853085 CAAATCCTTCTTGTGTTTGCGCTTGAATTCCTGAGCGAAGTGGTTCACCAGACGGTTGTC 853026 Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088 || || ||||| |||| | || | ||| | || | | || | ||| | || || Sbjct 853025 GAAGTCCTCACCGCCCAGATGGGTGTCTCCGGCGGTCGACTTCACCTCGAAGATGCCGTC 852966 Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148 || | |||| | | ||||| ||| || || |||| ||| || || || ||||| Sbjct 852965 ATCGATCGACAGGATCGACACATCGAAGGTACCGCCGCCCAGATCGAAGATCAGCACATT 852906 Query 518149 CATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATT 518208 ||| | || || ||||| ||||| ||||| | || || || || || || || Sbjct 852905 GCGTTCGCCGGCTGTCTTCTTATCCAGACCGTACGCGATGGCGGCCGCTGTCGGCTCGTT 852846 Query 518209 AATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTG 518268 || || | || || || | || | || |||| ||||| || || || || | ||| Sbjct 852845 GATGATACGCAGCACGTTCAATCCGGAGATGGTTCCGGCATCCTTCGTCGCCTGACGTTG 852786 Query 518269 TGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATA 518328 || ||||| || || ||||| ||||| || || || | || || || || | || Sbjct 852785 CGAGTCGTTGAAGTACGCAGGCACAGTGATGACAGCGTTGGTGACGGTCTTGCCCAGGTA 852726 Query 518329 AGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATA 518388 || ||||||| ||||| || | || | ||| || | | || ||| | | Sbjct 852725 GGCTTCGGCCGTTTCCTTCATCTTTGTCAACACCATCGAGCTGACCTCCTCAGGGAAGAA 852666 Query 518389 TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT--AATA 518446 ||| ||| | || || | | | |||||| || || | | | Sbjct 852665 CGACTTCTTCTCACCCTTGTACTCGACCTGGATCTTTGGTTTG---CCCTCAATCGACTC 852609 Query 518447 -ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 518505 || | ||| ||||||| ||||| || | || | | || | || | | || Sbjct 852608 CACCTCAAACGGCCAGTGCTTCATGTCGGCCTGGATGGCGGGATCGTCGAACTTACGGCC 852549 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 ||| | || || || || || || || ||||| || || || || | || | ||||| Sbjct 852548 AATCAGACGCTTAGCGTCGAAGATGGTGTTGGTCGGGTTCATGGCTACCTGGTTCTTGGC 852489 Query 518566 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 518625 ||||| ||||||||| | || || || || || | ||||| || || || || || || Sbjct 852488 GGCATCGCCAATCAGACGCTCGGTGTCAGTGAAGGCCACATACGACGGTGTGGTACGGTT 852429 Query 518626 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 518685 ||| || || || |||||||||||||| || || | || | || || ||||| || | Sbjct 852428 ACCCTGGTCGTTGGCAATAATTTCAACCTTGCCGTGCTGGAACACTCCGACACAGCTGTA 852369 Query 518686 AGTTGTTCCTAAATCAATACC 518706 || || || | ||||||||| Sbjct 852368 GGTCGTGCCCAGATCAATACC 852348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780807016778860