Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq19 86.0 8e-12 >seq19 Length=1744624 Score = 86.0 bits (94), Expect = 8e-12 Identities = 156/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 176911 CTTCCCACGAAGAGGGAAGACACCGTA-GTGATCGCGACCAACCACAGAGAGACCCGCAA 176969 ||| || || || || || |||||||| ||| ||||| || ||||| || |||| | Sbjct 911383 CTTACCGCGCAGCGGAAACACACCGTACGTG-TCGCGTCCGACCACCCCCAGCCCCGACA 911325 Query 176970 CCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGTG 177029 | || | |||||| || || || ||||| |||| |||||| || || ||| || | || Sbjct 911324 CGGCCAACGTTTTGGCCGAGTCTCCCTCGGTCAGGATGAGCGTGCAGTTGAGCGAAT-TG 911266 Query 177030 C-CGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAATTTTGGACTTTCGC 177088 | || ||| || | |||||| || |||| || ||||| || |||| || ||||| | Sbjct 911265 CGCGAACCGGCATCGTTCGCGTCCTCCAGCTTCGGAATGCCCTTAATCTTCGACTTCTTC 911206 Query 177089 GTACCGTCAGATTTTGAGAGTTCCTTCATCTCCTTAAACTTTG 177131 | ||| | ||| | || ||| | | |||||||||||| Sbjct 911205 GAGCCGGACGTTTTGGCCAGATCCGTTTGCGCCTTAAACTTTG 911163 Score = 84.2 bits (92), Expect = 3e-11 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 175994 GTAAAGATATACCTCGTTTGAGACGC-ATCCTTACCACCCATGAGACGCGTACCAAACTG 176052 || ||||| ||||||| | ||| ||||||||| ||| | | |||||||||||||| Sbjct 912342 GTGAAGATGTACCTCGGGCTGG-CGCTATCCTTACCGCCCGTCAACCGCGTACCAAACTG 912284 Query 176053 ACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGAC 176112 ||| | ||| | || || ||||| ||||| || | ||||| | ||||| |||| Sbjct 912283 ACCGCCCGGGTACAGCAGGTTGATGTTGTTGCTGCCGACGTAGTTCTGCGCCAGGTTGAT 912224 Query 176113 AATCGTGTCCGCGAGAGAGACT--TCACCGTGGTGGTACGCACTCTTCTCTGCGACAAAT 176170 ||| ||| |||| |||| || ||||| |||||||| | | || || || | Sbjct 912223 GATC--GTCGAACAGAGCGACTGCTCGCCGTGATGGTACGCGGACATTTCCGCCACCGAA 912166 Query 176171 GCCGCCAACTGCGCCACTTTCATCTC 176196 | |||||||| ||||| |||| ||| Sbjct 912165 CCTGCCAACTGGGCCACCTTCACCTC 912140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739994623200