Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq14 98.7 1e-15 >seq14 Length=2944040 Score = 98.7 bits (108), Expect = 1e-15 Identities = 522/822 (64%), Gaps = 29/822 (4%) Strand=Plus/Minus Query 105842 TTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACA 105901 ||||| || | | ||| ||||| | | | || || |||| ||||| | ||| ||| Sbjct 113569 TTCATTTCATCGTCCCACAGACCGTGCGTGGTCAGGTCCTTGATCAGATGATGGTTTACA 113510 Query 105902 ATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAG 105961 | | |||||| |||| || || || |||| ||||| |||||| ||||| || Sbjct 113509 ACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGACGTGTACGGTTCGAAC 113450 Query 105962 CATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGA 106021 | ||||| || |||| ||||| || || || ||||||||||| ||||| | || || Sbjct 113449 GACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGCTGTTGGCATCGGTGCTAGCAGCAGT 113390 Query 106022 CTGTTACGAAGACCCT--TTTCCTTGATGCGTTCCTTGAGAACATCCCAGT--CGTAGTT 106077 |||||||| || | ||| | || |||||| | | |||| | | || | Sbjct 113389 GAGTTACGAATGCCGTGCTTTGC--AATCTTTTCCTTCAACGCCACCCAATTCCACAGAT 113332 Query 106078 GAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCA-CCCCTTG-GGACGTGGGAGAA 106135 | | |||| | || |||||| || | || || | |||||| || ||| || Sbjct 113331 CCG-TCGGTTCCTTGTT-CCACATGTCGTACTGCAGAATGCCCTTGCTTAC--CGGACAA 113276 Query 106136 CCCTCAAATGTCTCATAGG----AACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAG 106191 || || | ||||| || | | |||||| | |||||||| ||||| || ||||| Sbjct 113275 CCTTCGTACGTCTCGTACGGCCCATCCTTGG----CGGCCAATTCGCAGCTAGCTTCCAG 113220 Query 106192 GGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC 106251 | | | | || ||||||||||| || | ||| | || || |||| || || Sbjct 113219 CGCTCCATAGTAGATGGTTTCAAATATTTGCTGATTAAGCTTCTGCGCTTGCTCACTCTC 113160 Query 106252 AAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGG 106311 | | ||| |||||| || |||| || | ||| || ||||| | || || || Sbjct 113159 GTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCCGATCGG 113100 Query 106312 TCTGTGTCGCATATTAGA---CTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAAT 106368 | ||| ||||| || || ||| ||| | || || || | || |||||| Sbjct 113099 ACGGTGGCGCATGTTCGAGCGCTT---CGCTTCCGGCACCGGGTAGTAGTTCACGTCAAT 113043 Query 106369 GACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA 106428 || ||| ||||| || || ||||| | || || | || || || |||| | Sbjct 113042 GATCTTGTTAAGATTGCGTGTCACGATCTTGGCGACCTCCTTCAGCTTCTCGAAATCGTA 112983 Query 106429 AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGC 106488 || ||| || | ||| || | | || || || ||||||||||| || || Sbjct 112982 CGTACGA---TCGGGCTGCACAAACATGTTCAACGCAATCGAGGCCAAATTGCATACGGC 112926 Query 106489 CGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGT 106548 | || ||||| | || || | || || || || | ||| || | || || || Sbjct 112925 CACTTCGTCCTTCGACGAATATTCCACTATCTCAGTGCAAAGGTTAGAGCATTTGATAGT 112866 Query 106549 CCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGT 106608 || | || | ||||| || || ||||||||||||||||| |||||||| || Sbjct 112865 GCCAATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGCATGTACGGTAC 112806 Query 106609 CCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATC 106650 ||||| ||| |||||||| || || || ||||| ||| Sbjct 112805 GCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATC 112764 Score = 98.7 bits (108), Expect = 1e-15 Identities = 522/822 (64%), Gaps = 29/822 (4%) Strand=Plus/Minus Query 105842 TTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACA 105901 ||||| || | | ||| ||||| | | | || || |||| ||||| | ||| ||| Sbjct 128280 TTCATTTCATCGTCCCACAGACCGTGCGTGGTCAGGTCCTTGATCAGATGATGGTTTACA 128221 Query 105902 ATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAG 105961 | | |||||| |||| || || || |||| ||||| |||||| ||||| || Sbjct 128220 ACCTGAAACTCGCCCGAAAGCACTCGTCGGTTGTAGACGTTCGACGTGTACGGTTCGAAC 128161 Query 105962 CATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGA 106021 | ||||| || |||| ||||| || || || ||||||||||| ||||| | || || Sbjct 128160 GACTCATTGTTGCCCAGTATTTGAGCAGTCGAAGCTGTTGGCATCGGTGCTAGCAGCAGT 128101 Query 106022 CTGTTACGAAGACCCT--TTTCCTTGATGCGTTCCTTGAGAACATCCCAGT--CGTAGTT 106077 |||||||| || | ||| | || |||||| | | |||| | | || | Sbjct 128100 GAGTTACGAATGCCGTGCTTTGC--AATCTTTTCCTTCAACGCCACCCAATTCCACAGAT 128043 Query 106078 GAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCA-CCCCTTG-GGACGTGGGAGAA 106135 | | |||| | || |||||| || | || || | |||||| || ||| || Sbjct 128042 CCG-TCGGTTCCTTGTT-CCACATGTCGTACTGCAGAATGCCCTTGCTTAC--CGGACAA 127987 Query 106136 CCCTCAAATGTCTCATAGG----AACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAG 106191 || || | ||||| || | | |||||| | |||||||| ||||| || ||||| Sbjct 127986 CCTTCGTACGTCTCGTACGGCCCATCCTTGG----CGGCCAATTCGCAGCTAGCTTCCAG 127931 Query 106192 GGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC 106251 | | | | || ||||||||||| || | ||| | || || |||| || || Sbjct 127930 CGCTCCATAGTAGATGGTTTCAAATATTTGCTGATTAAGCTTCTGCGCTTGCTCACTCTC 127871 Query 106252 AAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGG 106311 | | ||| |||||| || |||| || | ||| || ||||| | || || || Sbjct 127870 GTACGGAAAGCCCATCAAAATGAACGCATCGGCCATACCCTGGACACCGATGCCGATCGG 127811 Query 106312 TCTGTGTCGCATATTAGA---CTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAAT 106368 | ||| ||||| || || ||| ||| | || || || | || |||||| Sbjct 127810 ACGGTGGCGCATGTTCGAGCGCTT---CGCTTCCGGCACCGGGTAGTAGTTCACGTCAAT 127754 Query 106369 GACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA 106428 || ||| ||||| || || ||||| | || || | || || || |||| | Sbjct 127753 GATCTTGTTAAGATTGCGTGTCACGATCTTGGCGACCTCCTTCAGCTTCTCGAAATCGTA 127694 Query 106429 AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGC 106488 || ||| || | ||| || | | || || || ||||||||||| || || Sbjct 127693 CGTACGA---TCGGGCTGCACAAACATGTTCAACGCAATCGAGGCCAAATTGCATACGGC 127637 Query 106489 CGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGT 106548 | || ||||| | || || | || || || || | ||| || | || || || Sbjct 127636 CACTTCGTCCTTCGACGAATATTCCACTATCTCAGTGCAAAGGTTAGAGCATTTGATAGT 127577 Query 106549 CCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGT 106608 || | || | ||||| || || ||||||||||||||||| |||||||| || Sbjct 127576 GCCAATGTTTTGCTGGTTGCTTTTGCGATTGCACGCATCCTTGTACAGCATGTACGGTAC 127517 Query 106609 CCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATC 106650 ||||| ||| |||||||| || || || ||||| ||| Sbjct 127516 GCCCGTTTCCACCTGTGACTCGATGATCGCAAACCACAGATC 127475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978513824400