Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq9 98.7 6e-16
seq4 87.8 1e-12
>seq9
Length=6651167
Score = 98.7 bits (108), Expect = 6e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||||||| | || || ||||| ||||| ||||| || || | ||| | || ||
Sbjct 534598 AACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTC 534657
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||| || ||||| || || || || ||||| ||| |||| | |||||||||||
Sbjct 534658 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTG 534717
Query 34892 AATCTTCTGTTTGACGGATGCTATCG-ATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
||||| |||||| | |||| || | ||| ||| || || | || ||||| |
Sbjct 534718 GATCTTGGCCTTGACGTTCTCGATCGTATCCGACGG-CTCGACCTCCAGAGTGATGGTCT 534776
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || || || |||||||| || ||||||||
Sbjct 534777 TGCCAGTCAGCGTCTTCACGAAAATCTGCAT 534807
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||| ||||| ||||| || || | ||| | || |||
Sbjct 535002 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCC 535061
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || ||||| || || || || ||||| ||| |||| | ||||| |||||
Sbjct 535062 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCTTTGTCCTGG 535121
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | |||| || | ||| || || | || ||||| ||
Sbjct 535122 ATCTTGGCCTTGACGTTCTCGATCGTATCCGATGGCTCGACCTCCAGAGTGATGGTCTTG 535181
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || |||||||| |||||||||||
Sbjct 535182 CCAGTCAGCGTCTTCACGAAGATCTGCAT 535210
>seq4
Length=15719670
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/196 (70%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| || || || || || || | || |||| |||||||| || ||||| ||
Sbjct 4750592 TCCTTCTGGATATTGTAATCGGACAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAG 4750651
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || ||||| || |||| | ||||||||||| ||||| || || ||
Sbjct 4750652 ATGAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGGATCTTTGCCTTCAC--AT 4750709
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| |||| || || ||| || || | ||| ||||| || |||||||| || || |
Sbjct 4750710 TCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGA 4750769
Query 34969 CAAAGATCTGCATATT 34984
| ||||||||||| ||
Sbjct 4750770 CGAAGATCTGCATCTT 4750785
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324632373493680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |