Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17] 310 sequences; 183,103,254 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq2 105 9e-18 >seq2 Length=22738934 Score = 105 bits (116), Expect = 9e-18 Identities = 180/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 197022 CAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTC 197081 || ||||||||| || || ||||||||||| || || | | |||| | || || Sbjct 21503123 CAAATCCTCGTCCGAGAATCCGGTACCGATCTTGCAGATCGTCTGGTACTCTTCATTTTC 21503064 Query 197082 GGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTT 197141 | | ||| |||||||||| |||| | ||||| ||||| || | || || || Sbjct 21503063 GTCGTCGTAGCAGGCGAGTAGGAAACCACCGTAAGTTCCGGTACGTTTGCCTCTTCCTCG 21503004 Query 197142 GAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTT 197201 | |||| |||||||| |||||||| || | |||| ||| || | ||||||||||| Sbjct 21503003 GTAGCCACCGATAACGACCAGATCGAGCGAATCGCCCACTCCGGAGAGATAATCTTTCTT 21502944 Query 197202 CAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGT 197261 ||| || | |||| | | |||| || ||||| ||||| ||||| | | | || || Sbjct 21502943 CAGCTTCAACCAGTTGCGTGATCGTTTCGCAATTTCGTACGTTGCCTCACGGACAAGCGT 21502884 Query 197262 CTTGATCATCAATCCCTCGCA 197282 || | ||| | |||||||| Sbjct 21502883 TTTCACCATGAGGCCCTCGCA 21502863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676726977672800