Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20farauti_20[genbank_20GCA_5F000473445.2_202014-01-17]
310 sequences; 183,103,254 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq4 98.7 8e-16
seq1 96.9 3e-15
seq9 91.5 1e-13
>seq4
Length=15719670
Score = 98.7 bits (108), Expect = 8e-16
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | ||||| ||| || || ||| || || ||||||||||| || || | ||
Sbjct 4750565 AGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAATCGGACAGCGTGCGG 4750624
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| ||||| || || || ||||| ||||||| || | ||||||
Sbjct 4750625 CCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGGATACCCTCC 4750684
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || ||| | | | || || | ||| ||||| | |||
Sbjct 4750685 TTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTA 4750744
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770
|| || || ||||| | ||||| || || ||||||||| ||
Sbjct 4750745 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 4750786
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/228 (68%), Gaps = 1/228 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | ||||| || || ||| || || || || ||||| || || ||| | ||
Sbjct 15451516 AGTCGGAGCACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGAGTGCGG 15451457
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| ||||| || ||||| ||||| ||||||| || | || |||
Sbjct 15451456 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATTCCTTCC 15451397
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | || || | ||| ||||| | ||
Sbjct 15451396 TTGTCCTGGATCTTGGCCTTCACATTTTCGATCGTGTCCGAGGGCTCGACCTCAAGAGTG 15451337
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGTGTACG 48776
|| ||||| || || | ||||| || ||||||||||| || | ||||
Sbjct 15451336 ATGGTTTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT-GTTTCTACG 15451290
>seq1
Length=30017264
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | ||||| || || ||| ||| || || |||||||| || || || | ||
Sbjct 15159559 AGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCTGACAGGGTACGG 15159618
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| ||||| || ||||| ||||| ||||||| || | ||| |||
Sbjct 15159619 CCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATGCCTTCC 15159678
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || |||||| || || | | | || || | ||||||||||| |||
Sbjct 15159679 TTATCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCCGATGGCTCCACCTCCAGCGTG 15159738
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| |||| ||| || || || || |||||
Sbjct 15159739 ATGGTCTTTCCGGTCAGAGTCTTGACGAAGATTTGCAT 15159776
>seq9
Length=6651167
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
||||| | ||||| || || || ||| || || || ||||| || || ||| | ||
Sbjct 534590 AGCCGAAGAACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGT 534649
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| |||| |||||| ||||| || ||||| ||||| ||||| | || | ||||||
Sbjct 534650 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCC 534709
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | || |||| ||| ||||||| ||
Sbjct 534710 TTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTATCCGACGGCTCGACCTCCAGAGTG 534769
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || |||| || || || |||||||||||
Sbjct 534770 ATGGTCTTGCCAGTCAGCGTCTTCACGAAAATCTGCAT 534807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380936160770130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |